Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2664 ATGTCAGATGAAATGTTTAGAGATCTTTTTTTCTCGAATCCTTTTCGAGATGGTGGGTTCGGCGATTCAGAAACAGCCATGGATGACTACGACTCTCTAGCCAGAGCTTTTGGGTTGTCGGGTTCTTCGAATGAAATTTCGGGGACGACGACTCCGATGAATTCTTGCGGTTCGTTGTCGTCTTCGGATGCCGGAGCTGAGGAAGATGATTCTGGGAAGGAGAAGGATAAGCTGATGAAAGAGGTGGACGATAATGGAGGAGAAAGTTCTAAGTCTGCGGCTAAATCGAAGAAGAAAGGAGAGAAGAAAGAGAGAGAGCCGAGATTTGCTTTCATGACGAAGAGCGAGGTTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGACAGAAGGCTGTCAAGAACAGTGCTTTTCCTAGGAGCTATTACAGATGCACAACTCAGAAATGTGGAGTGAAGAAACGGGTAGAGAGATCGTTTGAAGATCCATCCATTGTAATTACGACGTACGAAGGCCAACACAACCATCCAATTCCAGCAACACTGAGAGGAAATCTGTCGGCGGCCGCCGCGTTTCCACCGTCCATGCTGCCACCAATGCCGGTGGCCGGTGGCCCCGCGTTCCTTCCTGAACTGTTGAGCAATGCTTCCGGCACCAACCAGGCCGTCGGCAACGGCGGCGCCTCCGTTTATTCACAGAGTAGCTTTGGCTATCCTTACAACGGCCGGCAGCCGGAATATGGGCTTCTGCAGGATATTTTCCCGGCTCCGTCGTCGTTCTTCAACCGGCAGCCGTGA 801 50.19 MSDEMFRDLFFSNPFRDGGFGDSETAMDDYDSLARAFGLSGSSNEISGTTTPMNSCGSLSSSDAGAEEDDSGKEKDKLMKEVDDNGGESSKSAAKSKKKGEKKEREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSAFPRSYYRCTTQKCGVKKRVERSFEDPSIVITTYEGQHNHPIPATLRGNLSAAAAFPPSMLPPMPVAGGPAFLPELLSNASGTNQAVGNGGASVYSQSSFGYPYNGRQPEYGLLQDIFPAPSSFFNRQP 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 79696956 79699024 + Tan0010572.1 Tan03g2664 748168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2664 266 Pfam WRKY DNA -binding domain 121 178 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g2664 266 ProSiteProfiles WRKY domain profile. 115 180 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g2664 266 MobiDBLite consensus disorder prediction 41 108 - -
Tan03g2664 266 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 186 IPR044810 GO:0003700(InterPro)
Tan03g2664 266 MobiDBLite consensus disorder prediction 41 65 - -
Tan03g2664 266 SUPERFAMILY WRKY DNA-binding domain 112 180 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g2664 266 Gene3D WRKY domain 105 181 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g2664 266 MobiDBLite consensus disorder prediction 66 108 - -
Tan03g2664 266 SMART WRKY_cls 120 179 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan03g2664 266 FunFam WRKY transcription factor 57 106 180 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2664 Tan-Chr3:79696956 Tan05g0625 Tan-Chr5:4648497 3.10E-38 dispersed
Tan03g2664 Tan-Chr3:79696956 Tan02g0079 Tan-Chr2:933675 3.90E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27113 PF03106 WRKY 3.20E-26 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2664 - - - 0.0