Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2667 ATGGCTGCTTCCACAATGGCTCTCTCCTCCCCATCTTTGGCTGGCCAGGCCGTCAAGCTCTCCCCCAACGCCCCTGAGGTTCAGGGCAATGGAAGAGTCAGCATGAGGAAGACCGCCAGCAAGCCAGTTTCCTCCGGCAGCCCATGGTACGGTCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACCTGACTGGAGAATTCCCCGGTGACTACGGCTGGGACACTGCCGGACTTTCAGCCGACCCCGAGACATTCGCCAAGAACCGTGAGCTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGGTGTGTCTTCCCGGAGCTTCTGTCCCGCAATGGCGTGAAGTTTGGTGAGGCAGTGTGGTTCAAGGCTGGTTCTCAGATCTTCAGCGAGGGAGGATTGGACTACTTGGGCAACCCCAGCTTGGTCCACGCACAGAGCATTTTGGCAATCTGGGCCTGCCAGGTCGTGCTGATGGGCGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCGCTCGGGGAGATAACTGACCCAATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCTGATGATCCAGAGGCCTTTGCTGAACTGAAGGTGAAGGAGCTCAAGAATGGAAGGCTGGCCATGTTCTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTTACTGGAAAGGGTCCTTTGGAGAACTTGGCTGACCACCTTGCTGACCCTGTGAACAACAATGCTTGGGCCTACGCCACAAACTTTGTCCCTGGAAAATGA 798 57.27 MAASTMALSSPSLAGQAVKLSPNAPEVQGNGRVSMRKTASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 79732554 79733351 - Tan0007756.1 Tan03g2667 748171
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2667 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Tan03g2667 265 MobiDBLite consensus disorder prediction 1 47 - -
Tan03g2667 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 265 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Tan03g2667 265 MobiDBLite consensus disorder prediction 1 17 - -
Tan03g2667 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
Tan03g2667 265 Pfam Chlorophyll A-B binding protein 65 232 IPR022796 -
Tan03g2667 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0465 Tan-Chr2:4347962 Tan03g2667 Tan-Chr3:79732554 3.80E-121 dispersed
Tan03g2667 Tan-Chr3:79732554 Tan05g2609 Tan-Chr5:77376359 5.20E-147 dispersed
Tan03g2667 Tan-Chr3:79732554 Tan03g2668 Tan-Chr3:79737198 6.30E-153 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2667 K08912 - csv:101221671 533.487