Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2668 ATGGCCGCCTCCACAATGGCTCTCTCATCCCCATCTTTGGCTGGCAAGGCCGTCAAGCTCTCCCCCAACGCGCCTGAGGTTCAGGGCAATGGAAGAGTCAGCATGAGGAAGAGCGCCAGCAAGCCAGTTTCCTCTGGCAGCCCATGGTACGGTCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACCTGACCGGAGAATTCCCCGGTGACTACGGCTGGGACACTGCCGGACTTTCAGCCGACCCCGAGACGTTCGCCAAGAACCGTGAGCTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGGTGTGTCTTCCCGGAGCTTCTGTCCCGCAACGGCGTGAAGTTTGGTGAGGCAGTGTGGTTCAAGGCTGGTTCTCAGATCTTCAGCGAGGGAGGATTGGACTATTTGGGCAACCCCAGCTTGGTCCATGCACAGAGCATTTTGGCAATCTGGGCCTGCCAGGTCGTGCTGATGGGCGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCGCTCGGGGAGATAACAGACCCAATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCTGATGACCCAGAGGCCTTCGCTGAGCTGAAGGTGAAGGAGCTCAAGAATGGAAGGCTGGCCATGTTCTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTTACTGGAAAGGGTCCTTTGGAGAACTTGGCCGACCACCTTGCTGATCCTGTCAACAACAATGCTTGGGCCTATGCCACAAACTTTGTTCCTGGAAAGTGA 798 57.52 MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 79737198 79737995 + Tan0004846.1 Tan03g2668 748172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2668 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Tan03g2668 265 MobiDBLite consensus disorder prediction 1 47 - -
Tan03g2668 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 265 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Tan03g2668 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
Tan03g2668 265 Pfam Chlorophyll A-B binding protein 65 232 IPR022796 -
Tan03g2668 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2668 Tan-Chr3:79737198 Tan05g2609 Tan-Chr5:77376359 8.00E-148 dispersed
Tan03g2667 Tan-Chr3:79732554 Tan03g2668 Tan-Chr3:79737198 6.30E-153 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2668 K08912 - csv:101221671 530.406