Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2792 ATGGAGGACTATATCGTTACCGAAGAACGACATGTCGATGACCACGAGCTCAGACTATTTGCAATATTTGATGGCCACTCCGGTTGCAATGTTGCAGAGTACTTGCAGAGCCATCTGTTTGATAACATCTTAAAATCTGATTTCTGGGAAGACCCTGAAGGAGCAATCAGGAGGAGAGGAGGTTCAACAGCAGTCACTGCTATACTGATCGATGGACAGAAGCTAATTGTTGCACACGTAGGTGACTCACGGGCGGTGGTATGCAGGAATGGCTCTGCAAAACCAATTACAGTCGATCGTGAACCAGAGAAGGAGAAGGAGCTGGTCGAGAGCCAGGGCGGATTTGTTGTACAAATGCAGCTAGCAATGTCAAGGGCATTTGGAGATGCAAAGCTCAAAGAACACATAAGTTCAGAACCAGATATCAGGATCCTCACAATTGACAATGAGACTGAGTTCACCATTTTGGCCAGTGATGGCCTCTGGAAGGTGATGTCAAACCAAGAGGCTTGTGATTGCATCAGAGAAATGGTTATGGATGCTCAAAAGGCTTCAGAGGAGTTGATCAAAGAGGCATTGTCTCGGGAGTGCTACGATGATATCTCCGGCATTGTTGTTACCTTCCATTGA 630 46.35 MEDYIVTEERHVDDHELRLFAIFDGHSGCNVAEYLQSHLFDNILKSDFWEDPEGAIRRRGGSTAVTAILIDGQKLIVAHVGDSRAVVCRNGSAKPITVDREPEKEKELVESQGGFVVQMQLAMSRAFGDAKLKEHISSEPDIRILTIDNETEFTILASDGLWKVMSNQEACDCIREMVMDAQKASEELIKEALSRECYDDISGIVVTFH 209
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 80906878 80908012 - Tan0004515.1 Tan03g2792 748296
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2792 209 SUPERFAMILY PP2C-like 1 209 IPR036457 -
Tan03g2792 209 Gene3D - 1 209 IPR036457 -
Tan03g2792 209 ProSiteProfiles PPM-type phosphatase domain profile. 1 208 IPR001932 -
Tan03g2792 209 SMART PP2C_4 1 206 IPR001932 -
Tan03g2792 209 PANTHER PROTEIN PHOSPHATASE 1 206 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan03g2792 209 CDD PP2Cc 1 208 IPR001932 -
Tan03g2792 209 Pfam Protein phosphatase 2C 59 201 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0201 Tan-Chr2:1718196 Tan03g2792 Tan-Chr3:80906878 1.30E-62 dispersed
Tan03g2792 Tan-Chr3:80906878 Tan11g1206 Tan-Chr11:9994268 2.40E-38 dispersed
Tan03g2792 Tan-Chr3:80906878 Tan02g0200 Tan-Chr2:1718196 5.70E-64 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2792 K17506 - csv:101211141 340.887