Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan03g2811 | ATGGTCGGAGGCTTTGAAGTGGGAGCTGTTCCCTACAACCCGGACGGTTGGGGTCCGCCGGACTCTACCGCCACTCTCGCCGCTTCCTCTAACCTCCCTCTCAATGTTCCTTTTGCCCCATTTTCTCGCTCCGATAAGCTTGGTCGTATCGCCGATTGGACTCGAACAATGAATAACCCTGGTCGCCCCAAGACTGCTTCAGATTCCGTCTTCGATTTCACCAATGACGATTCCTTCCCAGCTAATGCCGACGAGGACATGTCCTTCCGATTGGTTGACGGAAAGCCTCCTCCACGCCCCAAATTTGGCCCTAAGTGGCGATTCAACCAGCAGAGGACGCAGCTACCTCAGCGCCGTGACGAAGAAGTTGAGGCTCGAAAGCGCGAGGCTGAGAAGGAGCGGGCTCGCCGTGACCGTCTTTACAACCTCAACAGGTCTAATGTCAATGCACCCCGTCGTGAAGCTGCTGTCTTCAAATCCTCTGTGGAAATCCAACCCGAATGGAACATGCTTGATCAGATTCCCTTCTCCACCTTCTCGAAGCTGTCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGTGGGCTAGAGTTCTATGATCGAGCATACGACCGAATCACTCCCAAGAACGAGCGCCGTCTTGAGCGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACTGACGATCCTGTCATTCGTCGTCTCGCAAATGAGGACAAAGCCACAGTTTTTGCTACCGATGCCATCCTTTCTACTCTTATGTGTGCAACGAGATCAGTTTATTCCTGGGATATTGTGGTTCAGCGTGTTGGGAACAAGCTTTTCTTTGATAAGAGGGATGGGTCGCAACTTGATTTGCTTGCCGTCCATGAGACGTCTCAGGAACCCCTACCAGAGGCGAAGGACGATATCAATTCAGCTTACTCACTAAGCGTTGAAGCTGCTTACATTAATCAGAACTTCTCACAGCAAGTTTTAGTTAGGGACGGAAATAAGGTCGCCTTTGACGAGCCAAACCCATTTGCAAATGAGGGAGAGGAGGTCGCTTCTGTTGCTTATAGGTATAGGAGGTGGAAACTCGATGATGAAATGTATCTCGTGGCAAGGTGTGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAGAAATCATTCTTGACTTTGAATGCTCTTAATGAATTTGATCCCAAGTATTCTGGTGTTGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTTTTGGCCACTGAATTGAAGAACAATGCTAACAAATTGGCAAAATGGACAGCTCAAGCCCTGTTGGCTAGTGCCGATATGATGAAGTTGGGGTATGTCTCTAGGGTTCATCCTCGTGATCACTTCAACCATGTCATCTTAGCTGTGGTTGGATATAAACCTAAGGATTTTGCAACTCAAATTAACTTGAATACGTCTAACATGTGGGGTATTGTCAAATCCATCGTGGATTTGTGCATGAAACTGAATGAAGGTAAGTATGTTTTGGTTAAGGACCCATCAAAACCACAGGTTAGGATCTATGAAGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTGGCTGAGGAGGATCAAGTGCAACCTCCAGGAGAAGATGAAAATGGCGCCACTGCTAATGCGGTGACAGATGATGCCGAAGAGAAGGTTGATGCTGCTCAAGCTTAA | 1701 | 48.09 | MVGGFEVGAVPYNPDGWGPPDSTATLAASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDEMYLVARCEVQSVMEVNKQKSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFATQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGATANAVTDDAEEKVDAAQA | 566 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 81060316 | 81062567 | + | Tan0021871.1 | Tan03g2811 | 748315 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan03g2811 | 566 | Hamap | Eukaryotic translation initiation factor 3 subunit D [EIF3D]. | 3 | 529 | IPR007783 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
| Tan03g2811 | 566 | MobiDBLite | consensus disorder prediction | 114 | 134 | - | - | |
| Tan03g2811 | 566 | Pfam | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | 5 | 517 | IPR007783 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
| Tan03g2811 | 566 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 | 4 | 540 | IPR007783 | GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005737(InterPro)|GO:0005852(InterPro)|GO:0005852(PANTHER)|GO:0006413(PANTHER) | |
| Tan03g2811 | 566 | MobiDBLite | consensus disorder prediction | 531 | 566 | - | - | |
| Tan03g2811 | 566 | PIRSF | Transl_init_eIF3d | 1 | 547 | IPR007783 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
| Tan03g2811 | 566 | Coils | Coil | 118 | 138 | - | - | |
| Tan03g2811 | 566 | MobiDBLite | consensus disorder prediction | 88 | 134 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan03g2811 | K03251 | - | csv:101208923 | 1095.88 |