Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2816 ATGGATTCGGCAAGGAGTTGGTTTCAGAAGTTCCAACATAAAGTAAAGAATGAAACTGTAAATGACAATGAGGTTCAAGATGCACCTTCAAGTGCGACGAAACAGAAAGTTGAGGTTGCCAAGCAATATATTGAAAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGTTGGGTGTTGGAGAGGAGGCTTGCTGATGCCGATGTTTCTGAGGAAGACCAAATAAACGTGCTTAAGTATTTAGAACAGAAGGAGACAGAATACATGCGTCTTCGTAGACATAAAATGGGCGTTGAGGACTTCGAACTTTTGACAATTATTGGAAGGGGTGCATTTGGGGAGGTCAGACTTTGTAGAGAAAAAACGACAGGTCACGTGTATGCAATGAAGAAGCTTAAGAAATCTGAGATGCTTCGCAGGGGCCAGGTGGAACATGTCAAAGCTGAAAGAAATCTTCTAGCAGAGGTTGACAGTGCCTACATTGTGAAGTTATACTGCTCTTTTCAGGATGAAGATTTTTTGTATCTTATAATGCAATATCTTCCTGGAGGTGATATGATGACCCTCTTAATGCGCAAGGATATTTTGACGGAGGATGAGGCTAGATTTTATGTTGGGGAAACAGTCCTTGCTATAGAGTCCATTCACAAGCATAATTACATTCACAGAGACATCAAGCCTGATAATTTACTGCTTGATCGTTATGGCCACATTAAACTCTCAGATTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCTAATCTCACTGAGCAAGAAAATGTAATGGGGAAGACTGTCAGATCTTCTACAGAAAATGATAGTCAGTTCAGCGTATCGAAACGGACACAACAAGAACAATTGTTACATTGGCAAAAGAACAGACGAACATTGGCTTATTCAGCTGTTGGGACGCCAGACTATATTGCCCCAGAAGTGTTATTGAGGAAGGGATACGGAATGGAGTGTGACTGGTGGTCCCTCGGCGCAATTATGTACGAAATGCTTGTGGGATTTCCACCTTTCTATTCTGATGATCCAATGTCTACATGTAGAAAGATTATTAACTGGAGAACTCATCTGAGATTCCCAACAGAAGCAAAACTTTCCATTGAGGCTAAAGATCTTATTTGCAAACTTCTATGCAATGTTGAGCACAGAATTGGAACCAAAGGAGCTAAAGAAATTAAGGCGCATCCATGGTTTAAAGGTATACAATGGGATAAATTATATCAAATGGAAGCTGTCATCATCCCAGAGATCCATGATGAGTTAGATACACGAAATTTTGAGAAGTATGAAGAGCTGGGCGTGCCAGGTCAAACTCCATCAAAGTCTGGTCCTCTGAGAAAGAAGCTTTCACCCAAGGATGTGAACTTTGTTGGTTATACGTACAAGAATTTTGAAATTGTCAACGAACACCACTTGTCTGGAATTACTGAGATGAGGAAAAAGCCTAACAAGACCAAGAGACCATCTGTGACGACTCTATTTGCGGATTCTTCAGAGCAGCCTGTACAAAGAAGTTTTCCTAATCCTTTGCCAACCCATCTGGAAGTCTCGGAAAGCCCCGACCCATCACCTCGTTCAACCGACTCACCAAAACTGCCAAAGCGGTGGGGAAGATGA 1647 41.59 MDSARSWFQKFQHKVKNETVNDNEVQDAPSSATKQKVEVAKQYIENHYKSQMKSLQDRKERRWVLERRLADADVSEEDQINVLKYLEQKETEYMRLRRHKMGVEDFELLTIIGRGAFGEVRLCREKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDEDFLYLIMQYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLTEQENVMGKTVRSSTENDSQFSVSKRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIMYEMLVGFPPFYSDDPMSTCRKIINWRTHLRFPTEAKLSIEAKDLICKLLCNVEHRIGTKGAKEIKAHPWFKGIQWDKLYQMEAVIIPEIHDELDTRNFEKYEELGVPGQTPSKSGPLRKKLSPKDVNFVGYTYKNFEIVNEHHLSGITEMRKKPNKTKRPSVTTLFADSSEQPVQRSFPNPLPTHLEVSESPDPSPRSTDSPKLPKRWGR 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 81093592 81105570 - Tan0005682.2 Tan03g2816 748320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2816 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan03g2816 548 Gene3D Transferase(Phosphotransferase) domain 1 190 426 - -
Tan03g2816 548 SMART pkinase_C_6 409 473 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2816 548 FunFam Non-specific serine/threonine protein kinase 190 257 - -
Tan03g2816 548 FunFam Non-specific serine/threonine protein kinase 307 426 - -
Tan03g2816 548 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524(InterPro)
Tan03g2816 548 CDD MobB_NDR_LATS-like 40 101 - -
Tan03g2816 548 Pfam Protein kinase domain 302 408 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2816 548 Pfam Protein kinase domain 107 259 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2816 548 SMART serkin_6 106 408 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2816 548 FunFam Non-specific serine/threonine protein kinase 77 189 - -
Tan03g2816 548 Pfam Protein kinase C terminal domain 428 471 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2816 548 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 476 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Tan03g2816 548 ProSiteProfiles AGC-kinase C-terminal domain profile. 409 481 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2816 548 MobiDBLite consensus disorder prediction 497 522 - -
Tan03g2816 548 ProSiteProfiles Protein kinase domain profile. 106 408 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan03g2816 548 Gene3D Phosphorylase Kinase; domain 1 104 437 - -
Tan03g2816 548 MobiDBLite consensus disorder prediction 487 548 - -
Tan03g2816 548 SUPERFAMILY Protein kinase-like (PK-like) 87 455 IPR011009 -
Tan03g2816 548 CDD STKc_NDR_like 104 472 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2816 Tan-Chr3:81093592 Tan06g2405 Tan-Chr6:76338891 2.30E-226 dispersed
Tan03g2815 Tan-Chr3:81093592 Tan03g2816 Tan-Chr3:81093592 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67408 PF00069 Pkinase 3.30E-64 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2816 K08790 - csv:101208438 1040.02