Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2826 ATGTGGCCTTATATATGCAGGCACACAGCTTCAATTGCTGCTGGAAACCATGGCATTCCAGTGCTAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTATAAGGCACTGTACAAAAGCTTTGGAGGTTTTGCTGCCGATGTTGTTGCTGCAGTTGATCAGGCTGCTCAAGATGGGGTGGATATAATAAGTTTATCAATCACACCGAATAGGCGTCCCCCTGGCATTGCAACATTTTTTAATCCCATAGACATGGCACTGCTCTCTGCAGTGAAGGCTGGTATATTTGTTGTGCAAGCAGCTGGCAATACTGGACCAGCACCAAAGAGCATGTCTTCCTTCAGTCCATGGATCTTTACTGTTGGTGCCGCTTCTCATGATAGAAGCTATGCTAACTCTATAAGCCTTGGCAATAATGTCACCATTCCGGGAGTCGGACTTGCACCTGGAACTTATAATGACACAGAGTACAAACTAATTGCTGCAATGCATGCATTGAACAATGAGACACATGTTTCGGAGGACATGTATGTGGGTGAATGCCAAGACTCCAGTAACTTTGATCGGGATCTGATCGAAAGGAACCTTTTAATATGCAGCTACTCAATCAGATTCGTGCTCGGGCTTTCCACAGTTAAACAAGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGCTTTCGGCTTAACCCAATTCCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATACTACAATTCTTCTTTGGAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCTCGCATATCTGGAGGATTAAAGGCAAATTATAGCTCTACTGCCCCACAAATTATGTATTACTCTGCAAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCCAACTTGGTGGCTCCTGGAAATTTCATATGGGCTGCCTGGAGTTCTGTTGCCACTGACTCTGTTGAGTTTCTCGGTGAAAACTTCGCAATGATGTCGGGAACAAGCATGGCTGCTCCTCATATTGCTGGCCTAGCCTCACTCATAAAGCAGAAGTACCCTAGTCTTAGTCCTTCAGCCATTGCATCTGCACTATCGACCACTGCTTCTCTTTATGACAAGACCGGTGGACCAATCATGGCTCAGCGTGCTTATGCTAACCCTGAACAGAACCAGTCTCCAGCTACACCTTTTGATATGGGAAGTGGTTTTGTGAATGCAACTGCAGCTCTCAACCCAGGGTTGATCTTTGATTCCAGTTACGATGATTATATGTCGTTTCTTTGCGGTATCAACGGATCATCTCCTGTGGTCTTCAACTACACAGGCCAGAACTGCGGGCTTTACAATTCTAGCATCAGTGGAGCTGATTTGAACTTGCCCTCTGTCACAATAGCAAAACTTAACCAGTCGAGAGTAGTGCAACGAATCGTGACCAACATCGCTGGACCCGAGTTTTATAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTATGAAGGTTTCTCCGACTCGATTTACGATTGGCAGTGGGGAGAAACAAGAGCTGACCATATTCTTCAATGCCACGATGAACAGCTCGACTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAGTGCAGGCCATATTGTCAATATTCCTCTTTCAGTAATTTTGAAGATCTCATATAACAATACTACTAATTGA 1785 43.92 MWPYICRHTASIAAGNHGIPVLVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSISLGNNVTIPGVGLAPGTYNDTEYKLIAAMHALNNETHVSEDMYVGECQDSSNFDRDLIERNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDGLTKKISKFGAVARISGGLKANYSSTAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNFIWAAWSSVATDSVEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLSPSAIASALSTTASLYDKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSISGADLNLPSVTIAKLNQSRVVQRIVTNIAGPEFYSVGWSAPYGISMKVSPTRFTIGSGEKQELTIFFNATMNSSTASFGRIGLFGSAGHIVNIPLSVILKISYNNTTN 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 81174905 81178569 + Tan0012183.2 Tan03g2826 748330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2826 594 Gene3D - 136 304 - -
Tan03g2826 594 ProSiteProfiles Serine proteases, subtilase domain profile. 1 444 - -
Tan03g2826 594 Gene3D - 461 585 - -
Tan03g2826 594 Gene3D Peptidase S8/S53 domain 8 457 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan03g2826 594 Pfam Fibronectin type-III domain 490 583 IPR041469 -
Tan03g2826 594 Pfam Subtilase family 8 416 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan03g2826 594 SUPERFAMILY Subtilisin-like 8 448 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan03g2826 594 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 548 IPR045051 -
Tan03g2826 594 CDD PA_subtilisin_like 142 277 - -
Tan03g2826 594 ProSitePatterns Serine proteases, subtilase family, serine active site. 367 377 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2826 Tan-Chr3:81174905 Tan08g0879 Tan-Chr8:11423862 2.30E-142 dispersed
Tan03g2825 Tan-Chr3:81172126 Tan03g2826 Tan-Chr3:81174905 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2826 - - - 0.0