Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan03g2844 ATGGCGCCGGGTCTCAGAGATCTGCAGCTCACCCAGGTGGCTGATGAAGTTTTGGAGGATGTGCGGTTGCTTGATTCCTACGACAGGCCGGAGGAGAAATTCGGAAAAATTCAGGTCAGAGTTTCTGGGATGACCTGCGCTGCTTGTTCTAATTCCGTCGAAGCTGCTCTCAGGGACCTTAATGGCGTTTTCATGGCTTCCGTTGCCTTGCTTCAGAACAGAGCTGACGTCGTTTTTGACCCCAACTTGGTTCAGGATGATGAAATAAAGAAAGCGATAGAAGATGCTGGATTTGAGGCTGAGATTATACCCGAAACCAGTTCAGTTGGAAAGAAGACGAATGGAACGCTGGTGGGTCAATTTACCATAGGAGGTATGACATGTGCAGCATGTGTGAATTCAGTAGAAGCCATTTTAAAAGATCTTCCTGGTGTTAAAAGAGCAGTAGTTGCTTTGGCCACATCATTGGGGGAAGTTGAATATGATCCAACTCTAACCAGTAAAGACGATATAGTTAATGCAATTGAGGATGCTGGATTTGAAGCTTCATTTGTACAGAGCAGTGAGCAAGATAAAATTTTACTAGCGGTTACAGGCATTTCTGGGGAGGTTGATGTACAGTTTTTAGAAGTCATACTCAGCAACTTCAAGGGGGTGAGACAGTTTCTCTTTAACAGGACATCAGGAAAACTTGAAGTTGTTTTTGACCCAGAAGTTGTTGGCCCCAGATCCTTAGTGGATGAGATTGAGGGAAGAAGCAACAGGAAATTTAAGCTGCATGTTACGAGCCCTTACACGAGGTTGACGTCTAAAGATGTTGAAGAAGCTACCAACATGTTTCGGCTTTTTATCTCCAGTCTGTTTCTCAGTCTATTGATCTTTCTCCTACGAGTAGTATGTCCACATATTCCTTTAATCTACTCATTGTTACTCTGGCGCTGTGGGCCCTTCATCATGGACAATTGGTTAGAGTGGGGATTGGTGACTGTTGTGCAATTTGTCATTGGAAAACGCTTTTATGTTGCAGCTGCTAGAGCTCTTCGAAATGGTTCGACGAACATGGATGTCTTGGTTGCTTTGGGTACCACGGCCTCTTATGTCTATTCTGTTTGTGCACTTTTGTATGGTGCAGTCACCGGATTTTGGTCTCCTACTTATTTTGAAACGAGTGCTATGTTGATAACCTTTGTATTATTGGGAAAGTATTTGGAGTGTCTTGCCAAGGGGAAAACATCAGATGCCATCAAGAAATTGGTAGAACTTGCTCCTGCAACTGCTCTATTGCTTGTCCCAGATAAAGAAGAAAGGGAAATAGATGCTCTGTTAATTCAACCTGGCGACGTGTTGAAAGTTCTTCCCGGTGCAAAGATTCCCGCGGATGGCGTTGTTGTTTGGGGTTCAAGTTATGTCAATGAAAGTATGGTTACTGGAGAATCTATACCTGTTTTGAAGGAGGTTAACTCACACGTTATTGGGGGCACAATTAATTTTCATGGAGCCCTTCACGTTCAAGCGACGAAAGTAGGATCTGATGCAGTTTTGAACCAGATTATTAGTTTGGTTGAGACAGCACAAATGTCTAAAGCCCCAATTCAGAAATTTGCTGATTTTGTAGCAAGCATATTCGTTCCAACAGTTCTTGCTCTGGCATTATGTACATTATTTGCTTGGTACGTTGGAGGAATTCTTGGGGCTTATCCAGCAAATTGGCTCCCAGAAAATGGAAATTACTTTGTATTTTCACTCATGTTTGCGATAGCAGTGGTGGTCATTGCATGTCCTTGTGCACTAGGCTTGGCCACGCCCACTGCTGTCATGGTTGCAACAGGGGTTGGTGCTAGCAATGGCGTCTTGATCAAAGGAGGTGATGCTTTGGAGAGGGCCCAAAAGGTTAAGTACGTGATATTTGATAAAACAGGCACACTAACCCAAGGGAAAGCGACAGTTACCACTGCCAAAGTCTTCACTGATATTTCTCGAGGAGATTTTCTTAAGTTGGTTGCTTCAGCAGAGGCTAGTAGCGAACACCCATTGGGAAAAGCTATAGTGGAGTATGCACGTCATTTTCATTTCTTCGACGAGCATTCTACAGCCAAAAATGTGGAAAACCAAAGTAAAGAATCTTCTGGATGGCTTTTTGATGTCACAGATTTCTCTGCATTACCAGGCCAAGGAATCCAGTGCTTTATAGAGGGAAAAAGGATTCTTGTTGGCAACAGGAAGCTGATGAATGAAAGTGGAATCTCCATAGCACCTCATGTGGATAATTTCGTTATAGAGCTTGAAGAAAGTGCAAAGACTGGTATTCTTGTTGCAAATGATGACAGCTTAATTGGAGTTTTGGGAATAGCAGATCCACTGAAGAGAGAAGCTGAAATTGTTGTGGAGGGTCTTGTGAAAATGGGAGTTTCTCCAATCATGGTTACAGGGGATAATTGGAGAACGGCTCGAGCTGTCGCCAAAGAGCTGGGTATACAAGATGTGAGGGCAGAAGTAATGCCAGCAGGAAAAGCCGAAGTCATTCAAAACTTCCAAAAGGATGGAAGCATAGTTGCAATGGTAGGTGATGGCATCAACGACTCGCCTGCTCTAGCTGCTTCTGATATTGGAATCGCAATCGGTGCGGGGACTGATATTGCCATTGAGGCAGCAGACTTTGTCTTGATGAGAAATAATTTAGAAGACGTAATTACAGCCATTGATCTCTCAAGGAAGACTTTCAATCGGATTCGATTGAATTACGTGTTTGCGATGGCCTACAATGTGATAGCAATTCCTGTTGCTGCTGGAGTCTTCTTTCCTTCTTTGGGGGTTAAATTGCCTCCATGGGCAGCCGGTGCATGCATGGCTTTGTCATCTGTTAGTGTCGTTTGCTCTTCTTTACTTCTTAGGAGATACAAAAGACCAAGACTTACAACAATACTCGAAATCACTGTAGAATAG 2943 43.53 MAPGLRDLQLTQVADEVLEDVRLLDSYDRPEEKFGKIQVRVSGMTCAACSNSVEAALRDLNGVFMASVALLQNRADVVFDPNLVQDDEIKKAIEDAGFEAEIIPETSSVGKKTNGTLVGQFTIGGMTCAACVNSVEAILKDLPGVKRAVVALATSLGEVEYDPTLTSKDDIVNAIEDAGFEASFVQSSEQDKILLAVTGISGEVDVQFLEVILSNFKGVRQFLFNRTSGKLEVVFDPEVVGPRSLVDEIEGRSNRKFKLHVTSPYTRLTSKDVEEATNMFRLFISSLFLSLLIFLLRVVCPHIPLIYSLLLWRCGPFIMDNWLEWGLVTVVQFVIGKRFYVAAARALRNGSTNMDVLVALGTTASYVYSVCALLYGAVTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLLVPDKEEREIDALLIQPGDVLKVLPGAKIPADGVVVWGSSYVNESMVTGESIPVLKEVNSHVIGGTINFHGALHVQATKVGSDAVLNQIISLVETAQMSKAPIQKFADFVASIFVPTVLALALCTLFAWYVGGILGAYPANWLPENGNYFVFSLMFAIAVVVIACPCALGLATPTAVMVATGVGASNGVLIKGGDALERAQKVKYVIFDKTGTLTQGKATVTTAKVFTDISRGDFLKLVASAEASSEHPLGKAIVEYARHFHFFDEHSTAKNVENQSKESSGWLFDVTDFSALPGQGIQCFIEGKRILVGNRKLMNESGISIAPHVDNFVIELEESAKTGILVANDDSLIGVLGIADPLKREAEIVVEGLVKMGVSPIMVTGDNWRTARAVAKELGIQDVRAEVMPAGKAEVIQNFQKDGSIVAMVGDGINDSPALAASDIGIAIGAGTDIAIEAADFVLMRNNLEDVITAIDLSRKTFNRIRLNYVFAMAYNVIAIPVAAGVFFPSLGVKLPPWAAGACMALSSVSVVCSSLLLRRYKRPRLTTILEITVE 980
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 81429403 81436328 - Tan0022272.1 Tan03g2844 748348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan03g2844 980 ProSitePatterns E1-E2 ATPases phosphorylation site. 637 643 IPR018303 -
Tan03g2844 980 FunFam Copper-exporting P-type ATPase 734 785 - -
Tan03g2844 980 FunFam Copper-exporting P-type ATPase A 116 185 - -
Tan03g2844 980 Gene3D - 119 184 - -
Tan03g2844 980 FunFam Probable copper-transporting ATPase HMA5 760 911 - -
Tan03g2844 980 SUPERFAMILY HMA, heavy metal-associated domain 188 251 IPR036163 GO:0046872(InterPro)
Tan03g2844 980 Gene3D - 642 733 IPR023299 GO:0000166(InterPro)
Tan03g2844 980 Gene3D - 734 785 IPR023299 GO:0000166(InterPro)
Tan03g2844 980 PRINTS H+-transporting ATPase (proton pump) signature 826 842 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan03g2844 980 PRINTS H+-transporting ATPase (proton pump) signature 854 870 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan03g2844 980 PRINTS H+-transporting ATPase (proton pump) signature 885 910 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan03g2844 980 CDD P-type_ATPase_Cu-like 308 950 - -
Tan03g2844 980 SUPERFAMILY HMA, heavy metal-associated domain 115 188 IPR036163 GO:0046872(InterPro)
Tan03g2844 980 CDD HMA 120 183 IPR006121 GO:0046872(InterPro)
Tan03g2844 980 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 31 977 - -
Tan03g2844 980 Pfam haloacid dehalogenase-like hydrolase 631 867 - -
Tan03g2844 980 Gene3D - 408 525 - -
Tan03g2844 980 PRINTS P-type cation-transporting ATPase superfamily signature 877 889 - -
Tan03g2844 980 PRINTS P-type cation-transporting ATPase superfamily signature 635 649 - -
Tan03g2844 980 PRINTS P-type cation-transporting ATPase superfamily signature 471 485 - -
Tan03g2844 980 PRINTS P-type cation-transporting ATPase superfamily signature 854 873 - -
Tan03g2844 980 PRINTS P-type cation-transporting ATPase superfamily signature 779 790 - -
Tan03g2844 980 PRINTS P-type cation-transporting ATPase superfamily signature 801 811 - -
Tan03g2844 980 Gene3D - 602 911 IPR023214 -
Tan03g2844 980 ProSiteProfiles Heavy-metal-associated domain profile. 117 183 IPR006121 GO:0046872(InterPro)
Tan03g2844 980 ProSiteProfiles Heavy-metal-associated domain profile. 191 257 IPR006121 GO:0046872(InterPro)
Tan03g2844 980 Pfam Heavy-metal-associated domain 121 181 IPR006121 GO:0046872(InterPro)
Tan03g2844 980 Pfam Heavy-metal-associated domain 39 99 IPR006121 GO:0046872(InterPro)
Tan03g2844 980 Gene3D - 35 106 - -
Tan03g2844 980 SUPERFAMILY Calcium ATPase, transmembrane domain M 377 942 IPR023298 -
Tan03g2844 980 ProSiteProfiles Heavy-metal-associated domain profile. 35 101 IPR006121 GO:0046872(InterPro)
Tan03g2844 980 SUPERFAMILY Calcium ATPase, transduction domain A 429 521 IPR008250 -
Tan03g2844 980 NCBIfam HAD-IC family P-type ATPase 726 935 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan03g2844 980 NCBIfam HAD-IC family P-type ATPase 393 689 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan03g2844 980 CDD HMA 38 101 IPR006121 GO:0046872(InterPro)
Tan03g2844 980 FunFam Copper-exporting P-type ATPase A 33 103 - -
Tan03g2844 980 SUPERFAMILY HAD-like 634 960 IPR036412 -
Tan03g2844 980 SUPERFAMILY HMA, heavy metal-associated domain 33 104 IPR036163 GO:0046872(InterPro)
Tan03g2844 980 Pfam E1-E2 ATPase 421 613 - -
Tan03g2844 980 NCBIfam heavy metal translocating P-type ATPase 354 963 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Tan03g2844 980 SFLD Haloacid Dehalogenase 617 906 - -
Tan03g2844 980 ProSitePatterns Heavy-metal-associated domain. 123 152 IPR017969 GO:0046872(InterPro)
Tan03g2844 980 SFLD p-type atpase 617 906 IPR044492 -
Tan03g2844 980 FunFam Copper-transporting ATPase RAN1 642 733 - -
Tan03g2844 980 NCBIfam copper ion binding protein 36 100 IPR006122 GO:0005507(InterPro)
Tan03g2844 980 NCBIfam copper ion binding protein 120 182 IPR006122 GO:0005507(InterPro)
Tan03g2844 980 ProSitePatterns Heavy-metal-associated domain. 41 71 IPR017969 GO:0046872(InterPro)
Tan03g2844 980 FunFam Copper-transporting ATPase 1, putative 408 525 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2844 Tan-Chr3:81429403 Tan05g0024 Tan-Chr5:324037 0.00E+00 dispersed
Tan03g2844 Tan-Chr3:81429403 Tan09g1716 Tan-Chr9:68720537 2.50E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan03g2844 K17686 - csv:101205642 1703.72