Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0053 ATGGCCGACAATTTTCCCAAGAACATCCTCCAGAGCACTGCTCTTCTCCAGTATATACTGGAAGCCAATGCCTATCCGAGAGAGCACGAACAATTGAAGGAACTCAGAGAAACCACCTTCGGAAAGTTCGACAAGTCCCGATTGAGTTGCAGGAGCGCGATGTGTATACCGGCGGATCAAGGATTGTTTCTATCAATGCTTCTGAAACTGATGAATGCAAAGAAAACGATAGAGATCGGCGTATTCACTGGCTATTCGCTCCTAACCACTGCGCTTGCACTGCCCGTTGATGGCCAGATAATAGCTATTGATCCAGATAGAGAATCATTTGAGATTGGTTTGCCATTTATCAAAAAGGCAGGAGTTGATCACAAGATCAAATTTCTAGAATCTCAAGCATTGGTTGTCCTGAATGACCTCCTCAATGATGAGAAAGAAGGAGAGTTTGATTTTGCATTTGTGGATGCTAAGAAAGTAGAGTACATTAAATATCATGAGTTGCTTCTAAAATTGGTGAAGGTAGGTGGAGTAATTGCCTATGATAACACTCTGTGGTTTGGATCTGTGGCACTGAGCGACGACGTCGTTGAGGAAGTGTTGAAGGCAAATAGAATTCTTACACGAGAATTCAATGCTTTTCTAGTCAATGACTCACGCGTGGAGATAACTCTCCTCTCCATTGGAGATGGCTTCACTCTCTGCAGGCGTATTAAGTAA 717 43.24 MADNFPKNILQSTALLQYILEANAYPREHEQLKELRETTFGKFDKSRLSCRSAMCIPADQGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPVDGQIIAIDPDRESFEIGLPFIKKAGVDHKIKFLESQALVVLNDLLNDEKEGEFDFAFVDAKKVEYIKYHELLLKLVKVGGVIAYDNTLWFGSVALSDDVVEEVLKANRILTREFNAFLVNDSRVEITLLSIGDGFTLCRRIK 238
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 478879 481785 - Tan0020610.2 Tan04g0053 748457
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0053 238 PANTHER O-METHYLTRANSFERASE-RELATED 7 237 IPR050362 GO:0008757(PANTHER)
Tan04g0053 238 Pfam O-methyltransferase 24 237 IPR002935 GO:0008171(InterPro)
Tan04g0053 238 Gene3D Vaccinia Virus protein VP39 2 238 IPR029063 -
Tan04g0053 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 8 237 IPR002935 GO:0008171(InterPro)
Tan04g0053 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 236 IPR029063 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0053 Tan-Chr4:478879 Tan04g0055 Tan-Chr4:483406 9.30E-87 dispersed
Tan04g0052 Tan-Chr4:478879 Tan04g0053 Tan-Chr4:478879 4.00E-127 tandem
Tan04g0053 Tan-Chr4:478879 Tan04g0054 Tan-Chr4:483406 1.90E-111 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0053 K00588 - csv:101212121 343.199