Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g0053 | ATGGCCGACAATTTTCCCAAGAACATCCTCCAGAGCACTGCTCTTCTCCAGTATATACTGGAAGCCAATGCCTATCCGAGAGAGCACGAACAATTGAAGGAACTCAGAGAAACCACCTTCGGAAAGTTCGACAAGTCCCGATTGAGTTGCAGGAGCGCGATGTGTATACCGGCGGATCAAGGATTGTTTCTATCAATGCTTCTGAAACTGATGAATGCAAAGAAAACGATAGAGATCGGCGTATTCACTGGCTATTCGCTCCTAACCACTGCGCTTGCACTGCCCGTTGATGGCCAGATAATAGCTATTGATCCAGATAGAGAATCATTTGAGATTGGTTTGCCATTTATCAAAAAGGCAGGAGTTGATCACAAGATCAAATTTCTAGAATCTCAAGCATTGGTTGTCCTGAATGACCTCCTCAATGATGAGAAAGAAGGAGAGTTTGATTTTGCATTTGTGGATGCTAAGAAAGTAGAGTACATTAAATATCATGAGTTGCTTCTAAAATTGGTGAAGGTAGGTGGAGTAATTGCCTATGATAACACTCTGTGGTTTGGATCTGTGGCACTGAGCGACGACGTCGTTGAGGAAGTGTTGAAGGCAAATAGAATTCTTACACGAGAATTCAATGCTTTTCTAGTCAATGACTCACGCGTGGAGATAACTCTCCTCTCCATTGGAGATGGCTTCACTCTCTGCAGGCGTATTAAGTAA | 717 | 43.24 | MADNFPKNILQSTALLQYILEANAYPREHEQLKELRETTFGKFDKSRLSCRSAMCIPADQGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPVDGQIIAIDPDRESFEIGLPFIKKAGVDHKIKFLESQALVVLNDLLNDEKEGEFDFAFVDAKKVEYIKYHELLLKLVKVGGVIAYDNTLWFGSVALSDDVVEEVLKANRILTREFNAFLVNDSRVEITLLSIGDGFTLCRRIK | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 478879 | 481785 | - | Tan0020610.2 | Tan04g0053 | 748457 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g0053 | 238 | PANTHER | O-METHYLTRANSFERASE-RELATED | 7 | 237 | IPR050362 | GO:0008757(PANTHER) | |
Tan04g0053 | 238 | Pfam | O-methyltransferase | 24 | 237 | IPR002935 | GO:0008171(InterPro) | |
Tan04g0053 | 238 | Gene3D | Vaccinia Virus protein VP39 | 2 | 238 | IPR029063 | - | |
Tan04g0053 | 238 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 8 | 237 | IPR002935 | GO:0008171(InterPro) | |
Tan04g0053 | 238 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 15 | 236 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0053 | Tan-Chr4:478879 | Tan04g0055 | Tan-Chr4:483406 | 9.30E-87 | dispersed | |
Tan04g0052 | Tan-Chr4:478879 | Tan04g0053 | Tan-Chr4:478879 | 4.00E-127 | tandem | |
Tan04g0053 | Tan-Chr4:478879 | Tan04g0054 | Tan-Chr4:483406 | 1.90E-111 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g0053 | K00588 | - | csv:101212121 | 343.199 |