Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0095 ATGGAAGAAGAGATCGGAGAAGAGTTCAAGAGGAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCAAGAAATGTGTTACGTTATGTGTTAATTACAATCTAAAGCCTTCGGATATAGTTTCTAGTTGGGAAGTCTACTATCTAAACAGGCAATTAGATGGGTCAATGGTATTAATTGCACAGATGGATGGGTTCTTACAACATTTACAGAATGAGCAAAAAGAAGCAGTCATTAAAGGGGAAACAGATCTTCATGTTTACTCGAGCAAAGATGTGGACATGATTTTGAATGACGAGGATGAAGATCCAAATGAAGACATTCTTAAAACTCCAAATGGGAAATCTCAGAGCCTCCACAAGGATCAATTTGATATGACACCTTACACAAATCAAGGCTTGTTCTCGTCGGGAAAACCTTCGAAGCATGTGACACCCTTCGGCCAAAGAACAGAAAAATTTGTTGTGAGGTTCAGCATTAATAGCATGCCTGATAAGGAGACTGCTGAAAAGGAAGATAATTGCGAGAATGATGAGGATGCAATCATCAAGAAGTTTAATGCTCTTGAAAACCGAATCATGAAGCATGCTAAAGCTCTTGCTGCTACTGGGCACTACGAAGGAGCAGTGGACCCTACAGTTGCTTCGCAGAAAAGCATGTTTGCAGTAGGCATGATTTGTTGTGATGGTGAAGGACACTTGAACGATAAGTCCACCTTGTTGCAGAGCAGTGTCGAGCATTCAGGGGGGCAGCGAGTTCGTCTAGAATTACAAAACTTAAGTCAGTTTTCAATCTTTCCTGGCCAGGTTGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCATCCAAACTTGTTGATTCTTTTCCTTTGTCTGCCACTACTGACCCCATTCTGCCTCCAGCAAAGAAGATTGCTTTGAACCATGATATCCAGCCAATTAATCAACCTTCTACACAGTCAGAATTATCAATGATTATTGCATCAGGCCCCTATACAACGACAGACAATTTATTGTTTGAGCCTTTGACAGAGTTACTAGCATATGCAAAAAGAAAGCCTCCTCAGCTACTAATTTTGCTTGGGCCATTTGTTGATTCAGAACATTCTGATATCAAGAGAGGAACTGTAGAGATGAGCTTTGAGGAAATTTTCAACTTTGAAGTTCTCAGAAGGGTGCAAGATTATGCAGAACACATGGGTCCTGATGCACGTGTACTTTTGATGCCATCTATAAGGGATGCCAATCACGACTTTGTTTTTCCTCAGCCTGCTTTTGACATTCCATCTGATCTTAGACTTCAGATATCCAGTCTCCCAAACCCAGGCATTTTGGAAGCAAATCAGGCAAAGATAGCCTGCTGCACCATGGATATTCTCAGACACCTTAGTGGTGAAGAGCTGTCAAGAAATCTAACAAAGGGAACAGCCAACGACCGCTTGAGCACACTTGCAAGTCATATCCTCCGGCAGCGCAGCTTTTATCCTCTATACCCTCCAGCCGAAGGAGTTCCACTGGACTTTTCACTTGCCCCAAAAGCTCTTGACATCTCTGTAGTACCCGACATTCTCATTCTTCCATCCGACATGAAGCACTTCGTGAAGGTTATATCCCTTGGTGAGGGAGGTTCGGACGAAGAACGAGCGAGTTGCGTGTGTGTGAATCCCGGAAGATTGGCCAAGGGTGAAGGAGGGGGTACTTTTGTAGAGCTTAATTACTTTGGTAGACCTGACCAGATAAACGCTGCAGTTGTCAGCATATGA 1773 43.03 MEEEIGEEFKRSGFTFDEEEEILKKCVTLCVNYNLKPSDIVSSWEVYYLNRQLDGSMVLIAQMDGFLQHLQNEQKEAVIKGETDLHVYSSKDVDMILNDEDEDPNEDILKTPNGKSQSLHKDQFDMTPYTNQGLFSSGKPSKHVTPFGQRTEKFVVRFSINSMPDKETAEKEDNCENDEDAIIKKFNALENRIMKHAKALAATGHYEGAVDPTVASQKSMFAVGMICCDGEGHLNDKSTLLQSSVEHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATTDPILPPAKKIALNHDIQPINQPSTQSELSMIIASGPYTTTDNLLFEPLTELLAYAKRKPPQLLILLGPFVDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSIRDANHDFVFPQPAFDIPSDLRLQISSLPNPGILEANQAKIACCTMDILRHLSGEELSRNLTKGTANDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPKALDISVVPDILILPSDMKHFVKVISLGEGGSDEERASCVCVNPGRLAKGEGGGTFVELNYFGRPDQINAAVVSI 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 665347 671091 - Tan0005839.2 Tan04g0095 748499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0095 590 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 2 576 IPR016722 GO:0005658(PANTHER)|GO:0006270(PANTHER)
Tan04g0095 590 Pfam DNA polymerase alpha subunit B, OB domain 189 289 IPR054300 -
Tan04g0095 590 Gene3D - 307 479 - -
Tan04g0095 590 Gene3D - 480 586 - -
Tan04g0095 590 PIRSF DNA_pol_alpha_2 160 582 IPR016722 -
Tan04g0095 590 PIRSF DNA_pol_alpha_2 1 177 IPR016722 -
Tan04g0095 590 FunFam DNA polymerase alpha subunit B 1 74 - -
Tan04g0095 590 Gene3D - 1 76 IPR043034 -
Tan04g0095 590 Pfam DNA polymerase alpha/epsilon subunit B 329 538 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Tan04g0095 590 Pfam DNA polymerase alpha subunit B N-terminal 3 50 IPR013627 -
Tan04g0095 590 FunFam DNA polymerase alpha subunit B 309 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0094 Tan-Chr4:665347 Tan04g0095 Tan-Chr4:665347 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0095 K02321 - csv:101206268 1056.59