Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g0140 | ATGCTTCGCCTCGATCAGATTATCCATAGCATTTCCATGTGGGTTCCTCTAATCCTGCTGTTATCTTCTCTGTTGCTTCTTAAAACGAAGATGAAAGTGGCAACACACAGCAAGAAAAAGCTTGTTCCTCCAGGCCCTCCAAAGCTTCCTTTTTTGGGTCATTTCCACCTAATTGGCTCACTCCCCCATCGTTCTTTTCAGAATCTTTCAAGAAAATATGGCCCCGTCATGCTCCTCAAAATGGGCTCTCTCCCAACCATAGTAATCTCTTCCGCCGCCGCAGCAAAAGAGGTGTTCAAAGTTCACGATCTTGCTTGTTGCAGCCGGCCTCGCTCTGCCGCTTCTGGAAAATTTTCATACAACTATTTAGACATAGTCTTTTCCTCGTACGGTGATCATTGGAGGGAAGTTCGAAAGATTTGTGTGCTTGAGCTCTTCAGTGTTCGGCGTGTGCAGTCTTTTCAGCTAATTAGAGAAGAAGAGATCCGTCTGCTGTTAAAGTCCATCTCTCAATACTCATCTTCTACCATTCCAATTAATCTAAATGAGAAACTCTATTCTCTCACTGCAAACATAATAACTCGAATTGCTTTTGGCAAGAGCTTCAGAGGGGGTGAACTAGATAATCAGAATTTTCAAAAGATTATTCGTAGAGCAGCAAAAACAGTGGGAAATTTCTCGGCAACTGACTCCTTTCCCCGTGTGGGTTGGATTATTGATCGCCTCAGTGGTGTTCATAGGAGATTGGAGAAGAGTTTCGCTGAGTTGGATGCTTTTTTCCAACATGTAGTGGATGATCGCGATCGCATCAACTTTGGACAGACTTCGTCTTCGAATCATCAAGAAAACATTGTTGATGTTTTGTTGAAACTAGAGAGAAATCGCTCTGAATTTGACTCAGTAAAACTTACTAGAGATTGCATTAAGGCACTCGTCATGGATATATTTCTAGGTGGAGTGGAAACAGGAGCAAACACCCTTGTTTGGGCAATGGCAGAGCTTGTGAAGAATCCAAAGGTGATGAAGAAGCTACAAGAAGAGATCAGAAGTTGCATAAAAGATGAACAAGTGAAGGAGAGCGACCTCGAAAAGCTTCCATATCTAAAAGTGGTGATTAAGGAAGTTCTAAGGTTGCATGCACCCCTTCCACTTTTGATTCCAAGAGAAACTATATCCCATTTTAAGGTAAATGGTTATGATATTGATCCCAAAACTCAACTTCATGTTAATGCATGGGCAATCGGAAGAGACCCAGAATTGTGGACAAACCCAGAAGTTTTTTTGCCAGAGAGATTTATAGGAAGTAATATTGATTACAAGGGGCAATACTTCGAGTTATTACCATTTGGATCTGGTCGAAGAATTTGTCCTGGAATGAATATGGCAACCATTACAGTGGAGCTAGCACTCGCTAATCTATTGTTGTGCTTTGATTGGAAATTACCAAACAAAATGAAAGAAGAAGATGTGGACATGGAAGAGGACGTTGGTCTTACTGTTGCCAAGAAATCACCTCTTCAACTTCTTCCACTTCTATATAGCTCTCTCTCACAGGAAGCTTTCCATCAACCAAATCTCGTAAGAAAGAAAAAAAAAATGCTTAGCCTTGATCAGATTATGCATAGCATTTTCATGTGGGTTCCTTTAATAATCTTGCTGTTATCTTCTCTGCTGCTTCTTAAAACGAAGATGAAAGTGGCAACACACAACAAGAAAAAGCTTGTTCCTCCAGGCCCTCCAAAGCTTCCTTTTTTGGGTCATTTGCACCTCATTGGCTCCCACCCTCATCGCTCTTTCTTAAAACTTTCAAAAAAATATGGCCCCATCATGCTCCTCAAAATGGGTTCTATCCCAACCATCATAATCTCCTCCGCCGCCGCTGCAAAAGAGGTGTTCAAAGTTCACGACCTTGCTTCTTGCAGCCGACCTCGCACAGCCGCTGCTGGAAAATTCTCATACAACTATTTAGACATAGGTTTGTGTCCATATGGTGATCATTGGAGGGAAGTTCGAAAGATTTGTGTGCTTGAGCTCTTCAGTGCCAAGCGGGTGCAGTCGTTTCAGCTGATTAGAGAAGAAGAAATCGGTCTGCTGTTAAAGTCCATCTCTCAATCCTCATCTTCTGCCACTCCAATTAATCTAAGTGAGAAACTCTATTCTCTCACTGCAAACATGATAACCCGTATTGCTTTCGGCAAGAGCTTTAGAGGAGGTGAGTTAGATAATGAGAATTTTCAACAACTTATTCGTAGAGCAGTGGCAGCATTGGGATCCTTTTCCGCAACTGACTTCTTTCCCAGTGTGGGTTGGATTATTGATCGCCTCAGTGGTGTTCATGGGAGATTGGAGAATAGTTTCGCTGAGTTGGATGCTTTTTTCCAACATGTAGTGGATGATCGCATCAAATTTCGGCAGACTTCGTCTTCGAATCATCAAGAAAACGTTCTTGATGTTTTATTGAAACTAGAGAGAGATCGCTCTGAATTTGATGCAGTAAAACTTACTAAAGATTGCATAAAGGCACTCGTCATGGATATATTTCTAGCTGGAGTGGAAACAGGAGCAAGCACCCTTGTTTGGGCTATGACAGAGCTAGTCAAGAATCCAAAGGTAATGAAGAAGCTACAAGATGAGATCAGAAGTTGCATAAAAGAAGAACAAGTGAAGGAGAGCGACCTTGAAAAACTTAAGTATCTAAAAATGGTGGTGAAAGAAGTTCTAAGGTTGCATGCACCTGCTCCACTTCTCGTTCCAAGAGAAACTATGTCCCATTTTAAGCTAAATGGTTATGATATTGATCCCAAAACACGACTTCATGTTAATGCATGGGCGATCGGAAGAGATCCAGAATTGTGGACAAACCCAGAAGCTTTCTTGCCGGAGAGATTTATAGGAAGTAATATTGATTACAAGGGTCAACACTTTGAGTTATTACCATTTGGATCTGGTCGAAGAATTTGTCCTGGGATGAATATGGCAACCTTTACGCTGGAGCTGACACTGCCTAATCTGTTGTTATGTTTTGATTGGAAAAAAATGAGAGAAGAAGATGTCGACATGGAAGAGGATGTTGGTCTTACCACTGCCAAGAAATCACCTCTTCAACTTCTTCCAGTCCATTACTTCAACTCCAACTAA | 3138 | 41.62 | MLRLDQIIHSISMWVPLILLLSSLLLLKTKMKVATHSKKKLVPPGPPKLPFLGHFHLIGSLPHRSFQNLSRKYGPVMLLKMGSLPTIVISSAAAAKEVFKVHDLACCSRPRSAASGKFSYNYLDIVFSSYGDHWREVRKICVLELFSVRRVQSFQLIREEEIRLLLKSISQYSSSTIPINLNEKLYSLTANIITRIAFGKSFRGGELDNQNFQKIIRRAAKTVGNFSATDSFPRVGWIIDRLSGVHRRLEKSFAELDAFFQHVVDDRDRINFGQTSSSNHQENIVDVLLKLERNRSEFDSVKLTRDCIKALVMDIFLGGVETGANTLVWAMAELVKNPKVMKKLQEEIRSCIKDEQVKESDLEKLPYLKVVIKEVLRLHAPLPLLIPRETISHFKVNGYDIDPKTQLHVNAWAIGRDPELWTNPEVFLPERFIGSNIDYKGQYFELLPFGSGRRICPGMNMATITVELALANLLLCFDWKLPNKMKEEDVDMEEDVGLTVAKKSPLQLLPLLYSSLSQEAFHQPNLVRKKKKMLSLDQIMHSIFMWVPLIILLLSSLLLLKTKMKVATHNKKKLVPPGPPKLPFLGHLHLIGSHPHRSFLKLSKKYGPIMLLKMGSIPTIIISSAAAAKEVFKVHDLASCSRPRTAAAGKFSYNYLDIGLCPYGDHWREVRKICVLELFSAKRVQSFQLIREEEIGLLLKSISQSSSSATPINLSEKLYSLTANMITRIAFGKSFRGGELDNENFQQLIRRAVAALGSFSATDFFPSVGWIIDRLSGVHGRLENSFAELDAFFQHVVDDRIKFRQTSSSNHQENVLDVLLKLERDRSEFDAVKLTKDCIKALVMDIFLAGVETGASTLVWAMTELVKNPKVMKKLQDEIRSCIKEEQVKESDLEKLKYLKMVVKEVLRLHAPAPLLVPRETMSHFKLNGYDIDPKTRLHVNAWAIGRDPELWTNPEAFLPERFIGSNIDYKGQHFELLPFGSGRRICPGMNMATFTLELTLPNLLLCFDWKKMREEDVDMEEDVGLTTAKKSPLQLLPVHYFNSN | 1045 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 1033466 | 1040762 | + | Tan0007063.1 | Tan04g0140 | 748544 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g0140 | 1045 | CDD | CYP71-like | 605 | 1034 | - | - | |
| Tan04g0140 | 1045 | FunFam | Cytochrome P450 83B1 | 29 | 509 | - | - | |
| Tan04g0140 | 1045 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 980 | 989 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan04g0140 | 1045 | FunFam | Cytochrome P450 83B1 | 562 | 1037 | - | - | |
| Tan04g0140 | 1045 | CDD | CYP71-like | 72 | 503 | - | - | |
| Tan04g0140 | 1045 | SUPERFAMILY | Cytochrome P450 | 576 | 1038 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | Gene3D | Cytochrome P450 | 561 | 1037 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | Gene3D | Cytochrome P450 | 28 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PANTHER | CYTOCHROME P450 71B11-RELATED | 554 | 1039 | IPR050193 | - | |
| Tan04g0140 | 1045 | Pfam | Cytochrome P450 | 43 | 499 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | Pfam | Cytochrome P450 | 576 | 1029 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | SUPERFAMILY | Cytochrome P450 | 43 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | E-class P450 group I signature | 307 | 324 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | E-class P450 group I signature | 410 | 434 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | E-class P450 group I signature | 456 | 479 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | E-class P450 group I signature | 327 | 353 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | E-class P450 group I signature | 446 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | E-class P450 group I signature | 188 | 206 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | E-class P450 group I signature | 369 | 387 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | P450 superfamily signature | 987 | 998 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | P450 superfamily signature | 901 | 912 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | P450 superfamily signature | 849 | 866 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0140 | 1045 | PRINTS | P450 superfamily signature | 978 | 987 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g0140 | Tan-Chr4:1033466 | Tan04g0143 | Tan-Chr4:1069426 | 9.60E-245 | dispersed | |
| Tan04g0139 | Tan-Chr4:922015 | Tan04g0140 | Tan-Chr4:1033466 | 9.40E-131 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g0140 | - | - | - | 0.0 |