Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g0142 | ATGTCTCTCCTTCATCTTTTCCTCTTCCTCTCTCTAGTTTTCTTCATCCTCAATAAGAAAACATCTTCAAATAGAAAAAAGGGTCGTTTTCCCCCAAGCCCACCAAAGGTTCCAATTATAGGAAACTTGCACCAACTTGGCAAGCTCCCCCACAAATCTCTATGGCGGCTCTCTCAGCTCTACGGCCCCATCATGAGCCTCAACCTCGGTGGCATTGAAACCACCGTCATCTCATCCGCCGAGGCCGCCCACGCCCTCTTGAAAACTCACGATCTCAATAGCTGCAGCAGACCACAAACTCATAATATCAGGAAACTCACTTTTAATTTCCTCGACATAGCGTTTTCGCCCTATGGTGATTACTGGAGAGAGATAAGAAAGATTTGTGTTCTTGAGCTTTTTAGTGTCAAAAGAGTGAAATCTTATGAACCCATTAGAGAACAAGAAGTTGGTTTCCTTATTGAATCCATTTCGGAATTGGCTTCTTGTGGAGCTGCTGTCGATCTTACTGAAAAGTCCATTGCTCTCACTGCTGGTGTTATTTTTAGAATTGCTTTTGGGAAGAGGTTTGAAGGGAATGGATTTCATGAGCTTGTGAGTGAAACGGAGGCCTTGTTGGGAAGCTACAGTGCTTCTGAGTATTTTGCTGTTCCTTTTGTGGGGAAGGTCATTGATTGGCTTAGTGGACACCATGCAAGACTTGAAAAGGTTTTCAATGAGTTGAATGCTTTGTTTCAAGGGGTCATTGATGAACATCTTCGTCCTGAGAGAATAAAACAAGACCAAGATGACATAATTGATGTGCTTCTCGATATAAGTAAGCAGCAGGCTGCTCAACCTGGCTCTATTCCCATAACTCATGAAAGTATCAAGGCCATTCTTCTGAACATATTTTTGGGAGGATTAGACACGGGGTCCATTACAATGGTATGGGCAATGGCAGAACTTGCTAAGAACCCAAAATTAATGAAAAAGGCTCAAGATGAAATCAGAAATTATGTGGGGAAAAAAGGAAGGGTAACAGAAAGCGACACAGAAGAACTCCCATATCTAAAAATGATAGTAAAAGAAACATTGAGACTACATCCGCCAGCACCCCTTCTTCTTCCAAGAGAAACCATGTCCCATTTTCAAATTGAAGGCTATGATTTTTACCCCAAAACGATGGTTCAAGTGAATGCTTGGGCAATTGGGCGAGACCCCAAATGCTGGAAAAACCCAGAAGAGTTTTTCCCTGAGAGATTTGAAGAGAGCTCCATTGATTACAAAGGACAAAATTTTGAGTTTTTGCCGTTTGGGGCTGGCCGGAGAATTTGCCCTGCAATGCATATGGGGGTGAAAACAGTGGAGTTTGCTTTAGCGAATCTTTTGTACCATTTTGATTGGAAGCTGCCGGAGGGGATGAATGAGGAGGACTTTAACATGGAAGAGATTTCGGGTTTGAGCCTCACAATCTACAAGAAGTTGCCTCTCAAACTTGTGCCAGTCTCATACCATCCATGA | 1503 | 42.91 | MSLLHLFLFLSLVFFILNKKTSSNRKKGRFPPSPPKVPIIGNLHQLGKLPHKSLWRLSQLYGPIMSLNLGGIETTVISSAEAAHALLKTHDLNSCSRPQTHNIRKLTFNFLDIAFSPYGDYWREIRKICVLELFSVKRVKSYEPIREQEVGFLIESISELASCGAAVDLTEKSIALTAGVIFRIAFGKRFEGNGFHELVSETEALLGSYSASEYFAVPFVGKVIDWLSGHHARLEKVFNELNALFQGVIDEHLRPERIKQDQDDIIDVLLDISKQQAAQPGSIPITHESIKAILLNIFLGGLDTGSITMVWAMAELAKNPKLMKKAQDEIRNYVGKKGRVTESDTEELPYLKMIVKETLRLHPPAPLLLPRETMSHFQIEGYDFYPKTMVQVNAWAIGRDPKCWKNPEEFFPERFEESSIDYKGQNFEFLPFGAGRRICPAMHMGVKTVEFALANLLYHFDWKLPEGMNEEDFNMEEISGLSLTIYKKLPLKLVPVSYHP | 500 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 1047823 | 1050824 | - | Tan0009381.1 | Tan04g0142 | 748546 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g0142 | 500 | Gene3D | Cytochrome P450 | 15 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | FunFam | Cytochrome P450 83B1 | 16 | 494 | - | - | |
| Tan04g0142 | 500 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 432 | 441 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan04g0142 | 500 | PANTHER | CYTOCHROME P450 71B11-RELATED | 8 | 496 | IPR050193 | - | |
| Tan04g0142 | 500 | PRINTS | E-class P450 group I signature | 58 | 77 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | PRINTS | E-class P450 group I signature | 176 | 194 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | PRINTS | E-class P450 group I signature | 289 | 306 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | PRINTS | E-class P450 group I signature | 393 | 417 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | PRINTS | E-class P450 group I signature | 309 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | PRINTS | E-class P450 group I signature | 352 | 370 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | Pfam | Cytochrome P450 | 31 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | SUPERFAMILY | Cytochrome P450 | 31 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | PRINTS | P450 superfamily signature | 300 | 317 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | PRINTS | P450 superfamily signature | 353 | 364 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0142 | 500 | CDD | CYP71-like | 61 | 491 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g0139 | Tan-Chr4:922015 | Tan04g0142 | Tan-Chr4:1047823 | 9.40E-224 | dispersed | |
| Tan04g0142 | Tan-Chr4:1047823 | Tan04g0145 | Tan-Chr4:1099189 | 4.40E-155 | dispersed | |
| Tan04g0147 | Tan-Chr4:1112607 | Tan04g0142 | Tan-Chr4:1047823 | 1.90E-65 | dispersed | |
| Tan04g0142 | Tan-Chr4:1047823 | Tan04g0143 | Tan-Chr4:1069426 | 4.30E-142 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g0142 | - | - | - | 0.0 |