Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0142 ATGTCTCTCCTTCATCTTTTCCTCTTCCTCTCTCTAGTTTTCTTCATCCTCAATAAGAAAACATCTTCAAATAGAAAAAAGGGTCGTTTTCCCCCAAGCCCACCAAAGGTTCCAATTATAGGAAACTTGCACCAACTTGGCAAGCTCCCCCACAAATCTCTATGGCGGCTCTCTCAGCTCTACGGCCCCATCATGAGCCTCAACCTCGGTGGCATTGAAACCACCGTCATCTCATCCGCCGAGGCCGCCCACGCCCTCTTGAAAACTCACGATCTCAATAGCTGCAGCAGACCACAAACTCATAATATCAGGAAACTCACTTTTAATTTCCTCGACATAGCGTTTTCGCCCTATGGTGATTACTGGAGAGAGATAAGAAAGATTTGTGTTCTTGAGCTTTTTAGTGTCAAAAGAGTGAAATCTTATGAACCCATTAGAGAACAAGAAGTTGGTTTCCTTATTGAATCCATTTCGGAATTGGCTTCTTGTGGAGCTGCTGTCGATCTTACTGAAAAGTCCATTGCTCTCACTGCTGGTGTTATTTTTAGAATTGCTTTTGGGAAGAGGTTTGAAGGGAATGGATTTCATGAGCTTGTGAGTGAAACGGAGGCCTTGTTGGGAAGCTACAGTGCTTCTGAGTATTTTGCTGTTCCTTTTGTGGGGAAGGTCATTGATTGGCTTAGTGGACACCATGCAAGACTTGAAAAGGTTTTCAATGAGTTGAATGCTTTGTTTCAAGGGGTCATTGATGAACATCTTCGTCCTGAGAGAATAAAACAAGACCAAGATGACATAATTGATGTGCTTCTCGATATAAGTAAGCAGCAGGCTGCTCAACCTGGCTCTATTCCCATAACTCATGAAAGTATCAAGGCCATTCTTCTGAACATATTTTTGGGAGGATTAGACACGGGGTCCATTACAATGGTATGGGCAATGGCAGAACTTGCTAAGAACCCAAAATTAATGAAAAAGGCTCAAGATGAAATCAGAAATTATGTGGGGAAAAAAGGAAGGGTAACAGAAAGCGACACAGAAGAACTCCCATATCTAAAAATGATAGTAAAAGAAACATTGAGACTACATCCGCCAGCACCCCTTCTTCTTCCAAGAGAAACCATGTCCCATTTTCAAATTGAAGGCTATGATTTTTACCCCAAAACGATGGTTCAAGTGAATGCTTGGGCAATTGGGCGAGACCCCAAATGCTGGAAAAACCCAGAAGAGTTTTTCCCTGAGAGATTTGAAGAGAGCTCCATTGATTACAAAGGACAAAATTTTGAGTTTTTGCCGTTTGGGGCTGGCCGGAGAATTTGCCCTGCAATGCATATGGGGGTGAAAACAGTGGAGTTTGCTTTAGCGAATCTTTTGTACCATTTTGATTGGAAGCTGCCGGAGGGGATGAATGAGGAGGACTTTAACATGGAAGAGATTTCGGGTTTGAGCCTCACAATCTACAAGAAGTTGCCTCTCAAACTTGTGCCAGTCTCATACCATCCATGA 1503 42.91 MSLLHLFLFLSLVFFILNKKTSSNRKKGRFPPSPPKVPIIGNLHQLGKLPHKSLWRLSQLYGPIMSLNLGGIETTVISSAEAAHALLKTHDLNSCSRPQTHNIRKLTFNFLDIAFSPYGDYWREIRKICVLELFSVKRVKSYEPIREQEVGFLIESISELASCGAAVDLTEKSIALTAGVIFRIAFGKRFEGNGFHELVSETEALLGSYSASEYFAVPFVGKVIDWLSGHHARLEKVFNELNALFQGVIDEHLRPERIKQDQDDIIDVLLDISKQQAAQPGSIPITHESIKAILLNIFLGGLDTGSITMVWAMAELAKNPKLMKKAQDEIRNYVGKKGRVTESDTEELPYLKMIVKETLRLHPPAPLLLPRETMSHFQIEGYDFYPKTMVQVNAWAIGRDPKCWKNPEEFFPERFEESSIDYKGQNFEFLPFGAGRRICPAMHMGVKTVEFALANLLYHFDWKLPEGMNEEDFNMEEISGLSLTIYKKLPLKLVPVSYHP 500
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 1047823 1050824 - Tan0009381.1 Tan04g0142 748546
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0142 500 Gene3D Cytochrome P450 15 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 FunFam Cytochrome P450 83B1 16 494 - -
Tan04g0142 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan04g0142 500 PANTHER CYTOCHROME P450 71B11-RELATED 8 496 IPR050193 -
Tan04g0142 500 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 Pfam Cytochrome P450 31 483 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 SUPERFAMILY Cytochrome P450 31 495 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0142 500 CDD CYP71-like 61 491 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0139 Tan-Chr4:922015 Tan04g0142 Tan-Chr4:1047823 9.40E-224 dispersed
Tan04g0142 Tan-Chr4:1047823 Tan04g0145 Tan-Chr4:1099189 4.40E-155 dispersed
Tan04g0147 Tan-Chr4:1112607 Tan04g0142 Tan-Chr4:1047823 1.90E-65 dispersed
Tan04g0142 Tan-Chr4:1047823 Tan04g0143 Tan-Chr4:1069426 4.30E-142 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0142 - - - 0.0