Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g0143 | ATGCTTGGCCTTGATCACATAATGGATGACATTTTTATTTGGCTGGTTCCTTTAATCTTGCTGTTATCTTTTCTGCTGCTTGTTAAAACGAAGTTGAAAGTGGAACCACACAATAAGAAAAAGCTTGTTCCTCCAGGCCCTCCAAAGCTTCCTTTGTTGGGTCATTTCCACCTAATTGGCTCACTCCCCCATCGCTCTTTTTTGAAACTTTCAAGAAAATATGGCCCCATCATGCTCCTCAAAATGGGCTCTATCCCAACCATCATAATCTCCTCCGCCGCCACTGCAAAAGAGGTGTTCAAAGTTCACGATCTTGCTTGTTGCAGCCGGCCTCGCTTAGCCGCTGGTGCAAAATTCTCATACAACTATTTAGACATAGGTTTATGTCCATATGGTGATCATTGGAAGGAACTTCGAAAAATTTGTGTGCTTGAACTCTTCAGTTCTAGGCGGGTACAATCATTTAAGCTAATTATAGAAGAAGAGGTTGGTTTGTTATTAAAGTCCATCTCTCAATCCTCATCTTCTGGCACTCTAATTAATCTGAGTGAGAAATTGTATTCTCTCACTGCAAACATAATAACTCGAATTGCTTTTGGCAAGAGCTTCAGAGGGGGTGAACTAGATAATCAGAATTTTCAAAAGATTATTCGTAAAGCAGTGGCAGCAGCGGGAAGCTTTTCAGCGGCTGACTTCTTTCCTAGTGTAGGTTGGATTATTGATCGGCTCAGTGGTGTTCATAGGAGGTTGGAGAAGAGTTTTGTTGAGTTGGATGCTTTTTTCCAACATGTAGTCGATGATCGCATCAACTTTGGACATACTTCTCTGAATGATCAAGAAAACATTGTTGATGTTTTGTTGAAACTAGAGACAAATCGCTCTGAATTTGATGCACTGCAACTCACCAGAGATTGCATTAAGGCAGTTCTCATGGATATATTTCTAGCTGGGGTGGAAACAGGAGCAAGCACCATTGTTTGGGCTATGACAGAGTTGGTCAGGAATCCAAAGGTAATGAAGAAGTTACAAGAGGAGATTAGAAGTTGCGTAAAAGAAGATCAAGTGAAGGAGAGCGACCTCGGAAAGCTTCAATATCTAAAACTAGTAGTGAAAGAAGTTCTAAGATTGCATGCACCTGCTCCACTTCTCGTTCCAAGAGAAACTATGTCCCATTTTAAGCTAAATGGTTATGATATTGATCCAAAAATTCATCTTCATGTTAATGTATGGGCGATCGGAAGAGATCCAGAATTGTGGACAAACCCTGACATGTTCTTGCCCGAGAGATTTATAGGAAGTAGTATTGATTACAAAGGACAAGACTTTGAGTTATTACCATTTGGATCTGGTCGAAGAATTTGTCCTGGAATGAATATGGCAACCATTACGATGGAGCTCACATTGGCTAATATGTTGTTGTGTTTTGATTGGAAATTGCCTTACAAAATGAAAGCTGAAGATGTGGATATACAAGAGGAGTTTGGTCTTGTAGCTGTCAAGAAATCGGCTCTTCAACTTGTTCCAGTCCCTTACTTTAACTCCAATTAA | 1548 | 40.31 | MLGLDHIMDDIFIWLVPLILLLSFLLLVKTKLKVEPHNKKKLVPPGPPKLPLLGHFHLIGSLPHRSFLKLSRKYGPIMLLKMGSIPTIIISSAATAKEVFKVHDLACCSRPRLAAGAKFSYNYLDIGLCPYGDHWKELRKICVLELFSSRRVQSFKLIIEEEVGLLLKSISQSSSSGTLINLSEKLYSLTANIITRIAFGKSFRGGELDNQNFQKIIRKAVAAAGSFSAADFFPSVGWIIDRLSGVHRRLEKSFVELDAFFQHVVDDRINFGHTSLNDQENIVDVLLKLETNRSEFDALQLTRDCIKAVLMDIFLAGVETGASTIVWAMTELVRNPKVMKKLQEEIRSCVKEDQVKESDLGKLQYLKLVVKEVLRLHAPAPLLVPRETMSHFKLNGYDIDPKIHLHVNVWAIGRDPELWTNPDMFLPERFIGSSIDYKGQDFELLPFGSGRRICPGMNMATITMELTLANMLLCFDWKLPYKMKAEDVDIQEEFGLVAVKKSALQLVPVPYFNSN | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 1069426 | 1072152 | + | Tan0009210.1 | Tan04g0143 | 748547 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g0143 | 515 | CDD | CYP71-like | 73 | 504 | - | - | |
| Tan04g0143 | 515 | PANTHER | CYTOCHROME P450 71B11-RELATED | 21 | 509 | IPR050193 | - | |
| Tan04g0143 | 515 | Pfam | Cytochrome P450 | 44 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | SUPERFAMILY | Cytochrome P450 | 44 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | P450 superfamily signature | 454 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | P450 superfamily signature | 445 | 454 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | E-class P450 group I signature | 444 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | E-class P450 group I signature | 408 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | E-class P450 group I signature | 189 | 207 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | E-class P450 group I signature | 454 | 477 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | PRINTS | E-class P450 group I signature | 71 | 90 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | Gene3D | Cytochrome P450 | 29 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0143 | 515 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 447 | 456 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan04g0143 | 515 | FunFam | Cytochrome P450 83B1 | 30 | 507 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g0140 | Tan-Chr4:1033466 | Tan04g0143 | Tan-Chr4:1069426 | 9.60E-245 | dispersed | |
| Tan04g0143 | Tan-Chr4:1069426 | Tan04g0148 | Tan-Chr4:1116156 | 2.40E-217 | dispersed | |
| Tan04g0146 | Tan-Chr4:1107499 | Tan04g0143 | Tan-Chr4:1069426 | 1.40E-57 | dispersed | |
| Tan04g0142 | Tan-Chr4:1047823 | Tan04g0143 | Tan-Chr4:1069426 | 4.30E-142 | tandem | |
| Tan04g0143 | Tan-Chr4:1069426 | Tan04g0144 | Tan-Chr4:1088196 | 4.50E-171 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g0143 | - | - | - | 0.0 |