Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0145 ATGGACACACGTAGATACATGCTCTCTATCTATCTCTGGAAGTTGCAGCCTTCATCAAACAAAACCAAAATTTTTCAAATGATGATGCATAATAGCATTTTCACGATCTGGGTTCCTCTAATCTTGCTGTTATCTTGTCTACTGATTCTTAAAACGAAGAAGAAAGTTGAAAAACACAACAAGAAGCTTGTTCCTCCAAGCCCTCCAAAGCTTCCTTTTTTGGGTCATTTGCACCTCCTCGGATCCCTCCCTCATCGCTCTTTCTTTAAACTTTCAAAAAAATATGGTCCCGTCATGCTCCTTAAACTGGGTTCTGTCCGAACCATCGTCATATCCTCGGCCTCCGTTGCCAAAGAGCTGTTTAAACTCCACGATCTTGCTTCTTGCAGCCGAGCTCCCTTATCTGGTAACGGAAGATTGTCATACAACTATCTTGACATAAGTTTCTCTCCATACGGTAATTATTGGAGGGAAGTTCGAAAGATTTGTGTGCTTGAACTCTTCAGCACTAAGCGGGTGCAGTCGTTTCAGTTGATAAGAGAAGAAGAAGTGGGTTTGCTGTTAAAGTCCGTTTCTCAATTTTCATGTTGTGCAACCCCAGTTAATCTGAGTGAGAAATTTTATTCTCTCACTGCAAACGTAATAACCCGTGTTGCTTTTGGCAAGAGCTTTAGCGGAAGTGAATTAGACAATGAAAATTTTCATCTACTTATCCGTAGAGCATTAACGGCATTAGGAAGCTTCTCAGCAACTGATTTCTTTCCTACCGTTGGTTGGATTATTGATTGGCTCAGTGGTGTTCGTGGAAGGTTGGAAAAGAGTTTTGCTGAGTTAGATACTTTTTTCCAACATGTAATTGACGGTCGCGTCAACTTTGGAGCCACTTCTCAAAATGAAGAAAACGTTATTGATGTTTTGTTGAAAATCAAGAGAGAATCCTCTGAATTTGATGTTCTCCAACTCACTAACGATTGCATCAAGGCACTTATTATGGATATTTTTTTAGCCGGAGTGGACACGGGAGCAGGTGTTCTTGTTTGGGCAATGACAGAGTTGGCTAGAAATCCAAGAGTGATGAAAAAACTACAAGATGAGATCAGAAACTGCATAAAAGAAGATCAAGTAAAGGAGAGTGAACTTGAAAAGCTTGAATATCTTAAAATGGTGGTGAAAGAGGCTTTGAGATTACATGTACCAATCCCACTTCTCCTTACTAGAGAAACCATGTCCCATTTCAAGCTCAATGGTTACGACATTGACCCAAAAGTTCATCTCCATGTGAATGCTTGGGCAATTGCACGAGACCCGGATTATTGGAGTAACCCAGAAGAATTCTTGCCCGAAAGATTTATGGGAAGCAATGTCGATTACAAAGGACAGAATTTTGAGTTATTACCATTCGGAGCTGGTCGGAGAAGTTGTCCAGGGATTAACATGGCCGTCCTTGCAGTGGAACTAACGCTCGCTAATCTATTGCTTTGTTTTGATTGGAAATTGCTAGATGGAATGAAAGAAGAAGATGTGAGTATCGATGAGGATGTTGGTCTAACGGTTACCAAGAAATTACCACTTAAACTTATTCCAGTCCAATACTCAAGAGTTTAG 1605 40.56 MDTRRYMLSIYLWKLQPSSNKTKIFQMMMHNSIFTIWVPLILLLSCLLILKTKKKVEKHNKKLVPPSPPKLPFLGHLHLLGSLPHRSFFKLSKKYGPVMLLKLGSVRTIVISSASVAKELFKLHDLASCSRAPLSGNGRLSYNYLDISFSPYGNYWREVRKICVLELFSTKRVQSFQLIREEEVGLLLKSVSQFSCCATPVNLSEKFYSLTANVITRVAFGKSFSGSELDNENFHLLIRRALTALGSFSATDFFPTVGWIIDWLSGVRGRLEKSFAELDTFFQHVIDGRVNFGATSQNEENVIDVLLKIKRESSEFDVLQLTNDCIKALIMDIFLAGVDTGAGVLVWAMTELARNPRVMKKLQDEIRNCIKEDQVKESELEKLEYLKMVVKEALRLHVPIPLLLTRETMSHFKLNGYDIDPKVHLHVNAWAIARDPDYWSNPEEFLPERFMGSNVDYKGQNFELLPFGAGRRSCPGINMAVLAVELTLANLLLCFDWKLLDGMKEEDVSIDEDVGLTVTKKLPLKLIPVQYSRV 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1099189 1101461 + Tan0010099.1 Tan04g0145 748549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0145 534 SUPERFAMILY Cytochrome P450 65 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 Gene3D Cytochrome P450 49 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PANTHER CYTOCHROME P450 71B11-RELATED 43 529 IPR050193 -
Tan04g0145 534 FunFam Cytochrome P450 83B1 50 527 - -
Tan04g0145 534 CDD CYP71-like 94 524 - -
Tan04g0145 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan04g0145 534 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0145 534 Pfam Cytochrome P450 65 517 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0142 Tan-Chr4:1047823 Tan04g0145 Tan-Chr4:1099189 4.40E-155 dispersed
Tan04g0145 Tan-Chr4:1099189 Tan04g0148 Tan-Chr4:1116156 6.70E-210 dispersed
Tan04g0144 Tan-Chr4:1088196 Tan04g0145 Tan-Chr4:1099189 2.60E-170 tandem
Tan04g0145 Tan-Chr4:1099189 Tan04g0146 Tan-Chr4:1107499 1.60E-58 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0145 - - - 0.0