Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g0148 | ATGCTTAACCTTGATCAGACGATGCATAGTTTTTCCATCTGGGTGGTTTCTCTGTTCTTGCTATTGTCTTTCCTACTGCTTCTTAAAACAAAGACACACAACAAGAAACTTCCTCCAGGCCCTCCAAAGCTTCCTCTGTTGGGTCACTTGCACCTTATTGGCTCCCTCCCACATCGCTCTTTGTGGAAACTTTCAAGAAAATATGGCCCCATCATGCTCCTCAAACTCGGCTCTGTTCCAACCGTTGTAGTCTCCTCTGCTGCGGCTGCTAGAGAGGTGTTACAAGTGCATGACCTTGCTTGTTGCAGCAGACCTTGCTTAGCCGCTAGTGCAAGATTTTCATACAACTTTTTAGACATAGGTTTATCTCCATATAGTGATCATTGGAAGGAAGTTCGGAAGATTTGTGTTCATGAGCTCTTCAGCGCCCGCCGGGTGCAATCGTTTCAGCTTATCAGAGAAGAAGAGGTTGCTCTATTGTTGAAGTCAATCTCTCAATCTTCATCTCTTGAAATTCCTGTTGATCTGAGTGAGGAATCGTACACTCTCTTTGCAAATATAACAACACGGATAGCTTTTGGGAAGAGCTTTAGAGGGAGTGAACTAGATAATGGAAATCTCCACCAAGTTATCCGTAGAGCAATAGCAGCATTGGGAAGCTTCTCGATGACTGACTTCTTTCCTAGTGTGGGTTGGATTATTGATCGACTCAGTGGTGTTAATGGCAGGCTGGAGAAGAGCTTTGTTGAGCTAGATGCTTTTTTTCAACAAATAATTGACGACCGCATCAACTTTGAAGGGACTTCTCATAATGAAGAAAATATTGTTGATGTTTTGTTGAAAATGGAGAGAGATAGCTCGGAACCTAATACCCTACAACTTACTAAAGATTGCATCAAGGCACTAATCATGGATATATTTATAGCTGGAGTGAACCCAGGGGCCGGCACCATTATTTGGGCAATGACAGAACTAGTTAAGAATCCATGTGTAATGAAGAAGTTACAAGATGAGATCAGAAGTCGCATAAAAGAAGATCAAGTAAAGGAAAACGACCTCGAAAAACTTCAATATCTCAAAATGGTGGTGAAAGAGGTTCTAAGGTTGCACGCACCTGCCCCACTTCTCCTTCCAAGAGAAACCATGTCCCATTTCAAGCTCAATGGTTATGATATTAATCCCAAGATTCATCTTCATGTTAATGTATGGGCTATCGGACGAGACCCAGATTATTGGGCTAACCCAGAAGAATTCTTGCCGGAGAGATTTATGGGAAGCAGTATCGACTACAAAGGGCAGAATTTTGAGTTGTTACCGTTTGGAGCGGGTCGAAGAATCTGTCCTGGTTTGAACATGGGGATTGTTACAATGGAGCTAGCATTGGCTAATCTATTGCTACATTTTGATTGGAAATTGCCAAATGGGATGAAAGAAGGTGGTGTGGACATGGACATGGAAGAGGATGCTGGTCTAACAGTTGCAAAGAAATCACCTCTTAAACTAGTTCCAGTTTGCTACTACTAA | 1524 | 42.45 | MLNLDQTMHSFSIWVVSLFLLLSFLLLLKTKTHNKKLPPGPPKLPLLGHLHLIGSLPHRSLWKLSRKYGPIMLLKLGSVPTVVVSSAAAAREVLQVHDLACCSRPCLAASARFSYNFLDIGLSPYSDHWKEVRKICVHELFSARRVQSFQLIREEEVALLLKSISQSSSLEIPVDLSEESYTLFANITTRIAFGKSFRGSELDNGNLHQVIRRAIAALGSFSMTDFFPSVGWIIDRLSGVNGRLEKSFVELDAFFQQIIDDRINFEGTSHNEENIVDVLLKMERDSSEPNTLQLTKDCIKALIMDIFIAGVNPGAGTIIWAMTELVKNPCVMKKLQDEIRSRIKEDQVKENDLEKLQYLKMVVKEVLRLHAPAPLLLPRETMSHFKLNGYDINPKIHLHVNVWAIGRDPDYWANPEEFLPERFMGSSIDYKGQNFELLPFGAGRRICPGLNMGIVTMELALANLLLHFDWKLPNGMKEGGVDMDMEEDAGLTVAKKSPLKLVPVCYY | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 1116156 | 1117830 | + | Tan0002436.1 | Tan04g0148 | 748552 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g0148 | 507 | CDD | CYP71-like | 67 | 499 | - | - | |
| Tan04g0148 | 507 | Gene3D | Cytochrome P450 | 26 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PANTHER | CYTOCHROME P450 71B11-RELATED | 16 | 503 | IPR050193 | - | |
| Tan04g0148 | 507 | FunFam | Cytochrome P450 83B1 | 25 | 502 | - | - | |
| Tan04g0148 | 507 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan04g0148 | 507 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PRINTS | E-class P450 group I signature | 89 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | Pfam | Cytochrome P450 | 38 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0148 | 507 | SUPERFAMILY | Cytochrome P450 | 38 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g0143 | Tan-Chr4:1069426 | Tan04g0148 | Tan-Chr4:1116156 | 2.40E-217 | dispersed | |
| Tan04g0144 | Tan-Chr4:1088196 | Tan04g0148 | Tan-Chr4:1116156 | 2.00E-175 | dispersed | |
| Tan04g0145 | Tan-Chr4:1099189 | Tan04g0148 | Tan-Chr4:1116156 | 6.70E-210 | dispersed | |
| Tan04g0148 | Tan-Chr4:1116156 | Tan05g1943 | Tan-Chr5:68222447 | 8.20E-117 | dispersed | |
| Tan04g0147 | Tan-Chr4:1112607 | Tan04g0148 | Tan-Chr4:1116156 | 1.20E-110 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g0148 | - | - | - | 0.0 |