Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0167 ATGACGAAATTACCCTCTCCGACCGCCGCTGTCGCCGTCCTCACCCTCATCGCCGTCGTTTTCCCATTTCTTCCGGCGACCGAAGCTCTCGGCTCTGCCTCGACGCTCGCTGTCAGCTACGACTCCGCCACCGTCTGCGGCATCGTCGCCGAGCAGCCGACGCAAAGGATTTTGTGTTTCCGTAACGGTCAAACCATTTTTATTGAGCCAAATATCTCCTTCTCCGCCGTGTCAGGGGGCCGGAATACCTTCTGTGGCATAAGGGCCGGGGGCTACGCCCTTCTCTGCTGGGACTTCGACTCGACCACTGCCGCGTTTTCCCGGAGAAGACTCTATTACAACACCACCGTCCTTCTCGAGAATCTCGCCGTCGGCGACGACCAAATCTGCGCCATGGCGGTCGGCGCCGGCAATGTAACTTGCTGGCGAGAAGGTAACAACGCGAAAGTTGGATTTTCTTCTCTTCAATTTGATTCAATTTCTTCTGGGTTTGGATTTTCTTGCGGAATTTTAAAGGGGAATCAATCCGTTCGATGTTGGGGTCGAAATTCATCGATTGCGACCCTAATCGAAAATGGGTTTCGAAATATTTCAATGTCGACCATCGTCGCCGGTGGGTTTCATGCTTGTGGATTGAATTTCTCCGGTGGGTTGGTTTGTAGAGGGAACAACAATTTTGGGCAGTTGGATTTTCCTTCAAATTCATCCATGGGGTTCTCTGAATTGGCCCTCGGCGAACGCCATAGCTGTGGGATTTTGCTCTCGAATCGATCGGTGGTTTGTTGGGGAAGGTTGGGTTTCTCTGTTGATTCGATTCGAGAAACTTCTTTTGAGTTAATTTCTTCGGGATCGGATTTCGTTTGTGGATTAACAACGAGTAATTTCTCTGTTCTTTGTTGGGGGCCTGGTTGGTTGAATGATAGTTTTGGCCTTTTTTCACTCTCTCTTCCTAAGATTCTTCCTGGCCCTTGTGTTCAATCTTCTTGTAGCGATTGTGGTGTTTATCCTCTGTCTCAAACGCTCTGTTCTGGTTCTGGGAATGTCTGTAACCGCTGCTTGGTTACTGTTTCAACGCCACCGTCGCCTCCCCCGCCTCCTCCGCCGTCGCCACCGCCAATGGTGGCGACCCCATCATCTCCTCCGGCGGCCTTGAAAAAGGGTTTGTTGGCTTTTGCTATTGTGGGCTCAGTTGGGGCCTTTGCTGGGATTTGTACTGTTGTTTACTGTTTGTGGACTGGTGTTTGTTTTGGGCATAAGAAGATACATAACTCTGTTCAGCCCACCATTACTCGAGCTGCTAGCTCGAACGGCGGGACGACAACATCAAACACAAACAACAGCCCACCGTCACGATCGTCAACAATTCGGCGACAGGGGTCTCGGATAATGCGGAGGCAGAGGAGTGGCACCTCGTCGAAGCATGCGGACAGAGCAGAAGAATTCACTCTGGCCGAGCTTGCTTCAGCTACCAATGGCTTCTCCCATGAGAACAAGATCGGCGAGGGGAGCTTTGGCATCGTGTACCGGGGGAAACTGCCCGATGGGCGGGAAGTTGCAATCAAGAGAGGCGAAACGGGGCAGAAGACGAAGAAGTTTCAGGAGAAGGAGAGTGCTTTTGATTCAGAATTGGCTTTCTTGTCTAGGCTTCATCACAAGCATTTGGTGAGGCTAGTTGGGTATTGTGAGGAGAAAGATGAGAGGTTGTTGGTTTATGAGTATATGAAAAATGGTGCACTTTACAATCATCTTCATGACAAGAACAACTCTGAAAAGGCCAGCAGTGTTGTAAACTCTTGGAAAATGAGGATCAAAATTGCTTTAGATGCAGCCAGAGGAATTGAATATCTTCATAACTATGCAGTCCCTCCCATAATCCATAGAGATATCAAATCCTCCAACATTCTCCTCGACTCGAATTGGACAGCGAGAGTATCTGATTTCGGATTGTCATTGATGAGTCCAGGGTTGGACCGTGACTACCGACCGGCAAAGGCAGCTGGGACAGTTGGATACATTGATCCTGAGTACTATGGACTGAATGTTTTGACTGCTAAGAGTGATGTGTATGGGCTTGGAGTGGTGTTGTTGGAGCTTTTGACAGGGAAGAGAGCTATATTCAAGGATGATGAACAAGGAGGAACACTGGTGAGTGTGGTCGATTTTGCAGTGCCTGCAATTATGGTTGGAGAACTGGCGAAGATATTAGATCCAAGAGTCGGGCCACCGCAGATGAACGAAGCGGAGGCGGTGGAGCTTGTGTCTTACACAGCGATGCACTGCGTGCATTTGGAAGGGAAAGATCGGCCGACGATGACTGACATTGTTGCGAATTTGGAGCGAGCTTTGAATCTCTGTGATGATAGCCATGGCAGCATCTCTAGTGGTGGAATTTCCATTGTTTCAGAGTGA 2409 49.56 MTKLPSPTAAVAVLTLIAVVFPFLPATEALGSASTLAVSYDSATVCGIVAEQPTQRILCFRNGQTIFIEPNISFSAVSGGRNTFCGIRAGGYALLCWDFDSTTAAFSRRRLYYNTTVLLENLAVGDDQICAMAVGAGNVTCWREGNNAKVGFSSLQFDSISSGFGFSCGILKGNQSVRCWGRNSSIATLIENGFRNISMSTIVAGGFHACGLNFSGGLVCRGNNNFGQLDFPSNSSMGFSELALGERHSCGILLSNRSVVCWGRLGFSVDSIRETSFELISSGSDFVCGLTTSNFSVLCWGPGWLNDSFGLFSLSLPKILPGPCVQSSCSDCGVYPLSQTLCSGSGNVCNRCLVTVSTPPSPPPPPPPSPPPMVATPSSPPAALKKGLLAFAIVGSVGAFAGICTVVYCLWTGVCFGHKKIHNSVQPTITRAASSNGGTTTSNTNNSPPSRSSTIRRQGSRIMRRQRSGTSSKHADRAEEFTLAELASATNGFSHENKIGEGSFGIVYRGKLPDGREVAIKRGETGQKTKKFQEKESAFDSELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGALYNHLHDKNNSEKASSVVNSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWTARVSDFGLSLMSPGLDRDYRPAKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDDEQGGTLVSVVDFAVPAIMVGELAKILDPRVGPPQMNEAEAVELVSYTAMHCVHLEGKDRPTMTDIVANLERALNLCDDSHGSISSGGISIVSE 802
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1269572 1272707 + Tan0004214.1 Tan04g0167 748571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0167 802 FunFam Serine/threonine-protein kinase-like protein CCR4 574 794 - -
Tan04g0167 802 SUPERFAMILY Protein kinase-like (PK-like) 474 778 IPR011009 -
Tan04g0167 802 MobiDBLite consensus disorder prediction 359 378 - -
Tan04g0167 802 Gene3D Transferase(Phosphotransferase) domain 1 574 791 - -
Tan04g0167 802 Gene3D Phosphorylase Kinase; domain 1 454 573 - -
Tan04g0167 802 CDD STKc_IRAK 499 780 - -
Tan04g0167 802 Pfam Protein kinase domain 494 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0167 802 ProSiteProfiles Protein kinase domain profile. 493 782 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0167 802 SUPERFAMILY RCC1/BLIP-II 71 304 IPR009091 -
Tan04g0167 802 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 33 792 IPR044815 GO:0004674(InterPro)
Tan04g0167 802 MobiDBLite consensus disorder prediction 432 457 - -
Tan04g0167 802 MobiDBLite consensus disorder prediction 359 379 - -
Tan04g0167 802 FunFam serine/threonine-protein kinase-like protein CCR1 462 573 - -
Tan04g0167 802 Pfam Regulator of chromosome condensation (RCC1) repeat 202 228 - -
Tan04g0167 802 SMART serkin_6 493 782 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0167 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g0167 802 MobiDBLite consensus disorder prediction 432 476 - -
Tan04g0167 802 Gene3D - 64 308 IPR009091 -
Tan04g0167 802 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0167 Tan-Chr4:1269572 Tan08g2353 Tan-Chr8:74795384 8.30E-164 dispersed
Tan04g0167 Tan-Chr4:1269572 Tan02g0176 Tan-Chr2:1551200 1.90E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67420 PF00069 Pkinase 7.50E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0167 - - - 0.0