Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g0177 | ATGGCTTTTTTCTTCTTCTTCTTCTTCCTCTTGATCTCCTCTGTTTTCGCCTCCTCTCTCTTTCTCTTCCTCCGTCCGGCGAGATTCCGGCGGGTTCGCCTGCCGCCGGGAACTCTCGGCCTTCCCTTGATCGGAGAGACCCTTCAGCTCATCTCCGCCTACAAGACCGAGAACCCAGAACCGTTCATCGACGAGAGGGTTCGGCGGTTCGGACCGGTTTTTACGACTCATTTGTTTGGCGAGCCTACGGTTTTCTCGGCCGATTGGGAGACGAACCGGTTCATTCTTCAGAATGAGGAGAAGCTTTTTGAGTGTAGCTACCCCGGTTCGATTTCGAACCTGCTTGGTAAGCATTCTTTGTTGCTTATGAAAGGAAGTTTGCATAAGAGAATGCATTCTTTGACTATGAGCTTTGCGAATTCGTCCATTATTCGAGATCATCTTTTGGTCGATGTGGACCGCTTGATTCGGCTCAATTTGGAGTCTTGGACCGGCCGGATCTTCCTCATGGAGGAGGCCAAAAAGATAACGTTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGCTGCGAATGGACTCAAAATCTCATGAAGGAATATCTTCTTGTCATTGAAGGATTTTTTACCGTCCCTCTCCCTTTCTTGTCCTCCACTTACCGTCGAGCCATTCAGGCACGGAGGAAGGTGGCGGAGCAATTGGGGACGGTGGTTCGACGGCGAAGGAAAGAGAGCGAAGGCGAAGCGAGGAAGAAGGACATGCTCGGGGCGTTGCTCGCCGGAGAAGACGCCCTCTCCGACGAGCAAATAGTAGATTTTTTATTGGCTCTGTTGGTGGCCGGGTATGAAACGACGTCAACCACCATGACGCTTGCCGTTAAGTTTCTGACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCACGAGCAAATCAAAGCAAGGAAGAAGGAATCAGACCAACACCTCCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTGAATGAAACATTAAGAGTTGCCAACATAATCAGTGGGGTTTTTAGAAGAGCAATGACAGACGTAAATATCAAAGGTTATACAATTCCAAAGGGATGGAAGGTTTTTGCATCATTTCGTGCAGTACATTTGGACCATGATCATTTCAAAGATGCTCGCTCTTTTAATCCATGGAGATGGCAACAGAATAGCTCGGGGTCGACCACGGTAAATGCATTTACACCGTTCGGAGGAGGTCCGAGGTTATGCCCCGGTTACGAGCTTGCCAGAGTAGAACTCTCTGTTTTTCTTCATCATCTTGTCACCCAATTCAGTTGGGTTCCAGCAGAAGATGACAAGTTGGTATTTTTCCCAACTACAAGAACACAGAAGCGCTATCCTATCTACGTGACGCGTAAGAACGAAATTAGACAATGTAAAGACAGTCATCCATGA | 1449 | 48.1 | MAFFFFFFFLLISSVFASSLFLFLRPARFRRVRLPPGTLGLPLIGETLQLISAYKTENPEPFIDERVRRFGPVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDVDRLIRLNLESWTGRIFLMEEAKKITFELAVKQLMSFDRCEWTQNLMKEYLLVIEGFFTVPLPFLSSTYRRAIQARRKVAEQLGTVVRRRRKESEGEARKKDMLGALLAGEDALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHEQIKARKKESDQHLQWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDVNIKGYTIPKGWKVFASFRAVHLDHDHFKDARSFNPWRWQQNSSGSTTVNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFSWVPAEDDKLVFFPTTRTQKRYPIYVTRKNEIRQCKDSHP | 482 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 1380257 | 1387709 | - | Tan0016562.1 | Tan04g0177 | 748581 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g0177 | 482 | FunFam | Cytochrome P450 90A1 | 24 | 471 | - | - | |
| Tan04g0177 | 482 | CDD | CYP90-like | 66 | 470 | - | - | |
| Tan04g0177 | 482 | Pfam | Cytochrome P450 | 208 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | Gene3D | Cytochrome P450 | 24 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PRINTS | E-class P450 group I signature | 336 | 354 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PRINTS | E-class P450 group I signature | 411 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PRINTS | E-class P450 group I signature | 376 | 400 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PRINTS | E-class P450 group I signature | 269 | 286 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PRINTS | E-class P450 group I signature | 421 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PRINTS | E-class P450 group I signature | 289 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PANTHER | CYTOCHROME P450 26 | 33 | 447 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Tan04g0177 | 482 | PRINTS | P450 superfamily signature | 337 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PRINTS | P450 superfamily signature | 280 | 297 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PRINTS | P450 superfamily signature | 412 | 421 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | PRINTS | P450 superfamily signature | 421 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | SUPERFAMILY | Cytochrome P450 | 28 | 470 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g0177 | 482 | Coils | Coil | 303 | 323 | - | - | |
| Tan04g0177 | 482 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 414 | 423 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g1309 | Tan-Chr1:12832582 | Tan04g0177 | Tan-Chr4:1380257 | 5.80E-59 | dispersed | |
| Tan01g1310 | Tan-Chr1:12832582 | Tan04g0177 | Tan-Chr4:1380257 | 5.80E-59 | dispersed | |
| Tan02g1989 | Tan-Chr2:88851645 | Tan04g0177 | Tan-Chr4:1380257 | 3.60E-53 | dispersed | |
| Tan04g0177 | Tan-Chr4:1380257 | Tan04g2750 | Tan-Chr4:86931863 | 2.70E-101 | dispersed | |
| Tan04g0177 | Tan-Chr4:1380257 | Tan06g0181 | Tan-Chr6:1603976 | 3.20E-102 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g0177 | K09588 | - | csv:101216594 | 850.121 |