Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0177 ATGGCTTTTTTCTTCTTCTTCTTCTTCCTCTTGATCTCCTCTGTTTTCGCCTCCTCTCTCTTTCTCTTCCTCCGTCCGGCGAGATTCCGGCGGGTTCGCCTGCCGCCGGGAACTCTCGGCCTTCCCTTGATCGGAGAGACCCTTCAGCTCATCTCCGCCTACAAGACCGAGAACCCAGAACCGTTCATCGACGAGAGGGTTCGGCGGTTCGGACCGGTTTTTACGACTCATTTGTTTGGCGAGCCTACGGTTTTCTCGGCCGATTGGGAGACGAACCGGTTCATTCTTCAGAATGAGGAGAAGCTTTTTGAGTGTAGCTACCCCGGTTCGATTTCGAACCTGCTTGGTAAGCATTCTTTGTTGCTTATGAAAGGAAGTTTGCATAAGAGAATGCATTCTTTGACTATGAGCTTTGCGAATTCGTCCATTATTCGAGATCATCTTTTGGTCGATGTGGACCGCTTGATTCGGCTCAATTTGGAGTCTTGGACCGGCCGGATCTTCCTCATGGAGGAGGCCAAAAAGATAACGTTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGCTGCGAATGGACTCAAAATCTCATGAAGGAATATCTTCTTGTCATTGAAGGATTTTTTACCGTCCCTCTCCCTTTCTTGTCCTCCACTTACCGTCGAGCCATTCAGGCACGGAGGAAGGTGGCGGAGCAATTGGGGACGGTGGTTCGACGGCGAAGGAAAGAGAGCGAAGGCGAAGCGAGGAAGAAGGACATGCTCGGGGCGTTGCTCGCCGGAGAAGACGCCCTCTCCGACGAGCAAATAGTAGATTTTTTATTGGCTCTGTTGGTGGCCGGGTATGAAACGACGTCAACCACCATGACGCTTGCCGTTAAGTTTCTGACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCACGAGCAAATCAAAGCAAGGAAGAAGGAATCAGACCAACACCTCCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTGAATGAAACATTAAGAGTTGCCAACATAATCAGTGGGGTTTTTAGAAGAGCAATGACAGACGTAAATATCAAAGGTTATACAATTCCAAAGGGATGGAAGGTTTTTGCATCATTTCGTGCAGTACATTTGGACCATGATCATTTCAAAGATGCTCGCTCTTTTAATCCATGGAGATGGCAACAGAATAGCTCGGGGTCGACCACGGTAAATGCATTTACACCGTTCGGAGGAGGTCCGAGGTTATGCCCCGGTTACGAGCTTGCCAGAGTAGAACTCTCTGTTTTTCTTCATCATCTTGTCACCCAATTCAGTTGGGTTCCAGCAGAAGATGACAAGTTGGTATTTTTCCCAACTACAAGAACACAGAAGCGCTATCCTATCTACGTGACGCGTAAGAACGAAATTAGACAATGTAAAGACAGTCATCCATGA 1449 48.1 MAFFFFFFFLLISSVFASSLFLFLRPARFRRVRLPPGTLGLPLIGETLQLISAYKTENPEPFIDERVRRFGPVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDVDRLIRLNLESWTGRIFLMEEAKKITFELAVKQLMSFDRCEWTQNLMKEYLLVIEGFFTVPLPFLSSTYRRAIQARRKVAEQLGTVVRRRRKESEGEARKKDMLGALLAGEDALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHEQIKARKKESDQHLQWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDVNIKGYTIPKGWKVFASFRAVHLDHDHFKDARSFNPWRWQQNSSGSTTVNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFSWVPAEDDKLVFFPTTRTQKRYPIYVTRKNEIRQCKDSHP 482
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 1380257 1387709 - Tan0016562.1 Tan04g0177 748581
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0177 482 FunFam Cytochrome P450 90A1 24 471 - -
Tan04g0177 482 CDD CYP90-like 66 470 - -
Tan04g0177 482 Pfam Cytochrome P450 208 452 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 Gene3D Cytochrome P450 24 471 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PANTHER CYTOCHROME P450 26 33 447 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Tan04g0177 482 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 SUPERFAMILY Cytochrome P450 28 470 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g0177 482 Coils Coil 303 323 - -
Tan04g0177 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1309 Tan-Chr1:12832582 Tan04g0177 Tan-Chr4:1380257 5.80E-59 dispersed
Tan01g1310 Tan-Chr1:12832582 Tan04g0177 Tan-Chr4:1380257 5.80E-59 dispersed
Tan02g1989 Tan-Chr2:88851645 Tan04g0177 Tan-Chr4:1380257 3.60E-53 dispersed
Tan04g0177 Tan-Chr4:1380257 Tan04g2750 Tan-Chr4:86931863 2.70E-101 dispersed
Tan04g0177 Tan-Chr4:1380257 Tan06g0181 Tan-Chr6:1603976 3.20E-102 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0177 K09588 - csv:101216594 850.121