Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0233 ATGGAATATTGCCATGGATTCTCTTTCAATTGCAGGCTTTTGCTAGTGGCTTTTGCCTGCACTTTGCTTTTCACCTCCCAAGCAGCTGATGATAGAAAGGTATATGTTGTATACTTGGGCAAATCATCTGAAGGAGGTTTCTCAGCTGCATCTGAACGACATGCCAATATGCTTCAACAAGTTCTTACCACCAGTGATGCATCCAAATCTCTGGTGTATAGCTACCACCGGAGCTTCAGCGGCTTTGCAGCGAGACTCAACGAGGAGGAGGCTCAGAAACTCGCCGAGATGGATGAAGTTGTGTCTGTATTTCCAAGTGAAAAGAAGCATCTTCACACGACAAGGTCATGGGATTTCATGGGTTTATTCGAACGAGCTCGAAGAACAAGCTTGGAGAGCGATTTGGTTATTGGAATGTTGGATACTGGGATTTGGCCGGAATCTAAAAGCTTTTCCGATGAAGGGTTTGGTCCGCCGCCGGCTAAGTGGAAAGGCGAATGCCAATCGTCTTCCAATTTCACCTGCAACAATAAAATAATCGGAGCTCGATTTTTCCGGAGCGAGCCTCTCAGCGGCGAAGGCGACATTCTTTCTCCAAGAGATACAGAAGGTCATGGAACCCACACCTCGTCCACCGCCGCCGGCAATTTGGTCACCGGCGCCAGCCTCTTCGGCCTTGCCCTCGGCACCTCTCGCGGCGGCGCTCCTTCCGCCCGCATTGCCGTCTACAAGATCTGCTGGGCCGACGGTTGCTTCGACGCCGACATCCTCGCAGCTTTCGACAATGCAATCGCCGATGGCGTCGACATCATCTCCATTTCCGTCGGAGGTTTTATCGCCAAAAATTACTTCAACGATTCAATCGCAATTGGGGCTTTTCACGCGATGAAGAATGGGATTCTGACTTCAAATTCTGGTGGGAATTCTGGCCCTAGCCTTGGCAGTATCACGAATGTTTCTCCATGGTCGCTATCCGTGGCTGCTAGCACCATTGATAGGAAGTTTGTGACAAATGTGAAGTTGGGTAATGGAGAATCCTTTCTGGGGATCTCTGTGAACACCTTCCAACTTGGAGAGAAGTTCTTTCCACTTATATATGCTGGTGATGCTCCCAATAGCACTGCAGGTTTCAATGGATCATTGTCAAGGTTCTGCTTCCCAGGTTCTTTGGACGTGAACCTAGTTCATGGGAAGATTGTTTTTTGCGATGAGATTGGTGATGGAGAAACAGCTCTGAGTAGTGGTGCGGTTGGTACAATTATGCAAGATGCTGGTCTCCAAGATGTTGCCTTTCTTTTCCCATTGCCTGCTTCCAAGTTAGACTTGAACGCTGGGAAGAATGTTTTCCAGTACCTGAGATCAACCAGTAATCCAGTAGCTATCATAGAGAAGAGTACAACCATTGAGGATCTATTAGCTCCATCTGTTGTTTCCTTCTCATCAAGAGGGCCTAACATAGTTACACTGGACATTCTCAAGCCTGATTTGGTAGCACCAGGAGTGGATATACTCGCATCTTGGTCTGAAGGTTCAACAATTACAAGTTTAACAGGGGATAACAGAATAGCTCCATTTAACATAATCTCTGGCACATCCATGGCTTGCCCACATGCGACTGGAGCAGCTGCCTATGTCAAATCTTTCCACCCAACTTGGTCTCCAGCTGCTATTAAGTCTGCACTTATGACAACAGCTTTTCCCATGACTCCAAAGGTAAACACAGATGCTGAGTTTGCATATGGAGCAGGTCACTTAAATCCAGTAAATGCCATTAACCCCGGTTTAGTCTATGATGCCGAAGAGATTGATTACATAAAGTTCTTATGTGGGCAAGGATATAGTACCAAAAATCTTCGTCTTGTTACTGGTGACCAAAGCAACTGTTCGGATGTTACAAAAACAGCTGCATCAGATCTAAACTATCCATCTTTTGCTCTGTTGATCAAATCTCGAAGATTGGTTACTCGTGTCTACCACAGGACTGTCACGAACGTCGGGCTGCCAGTGTCAACATACAAAGCGATTATTCAAGCTCCAACCGGGCTCGAAGTTACAGTACGCCCTGCTACTCTTTCTTTCAGTTCTCTTGGACAAAAGATATCTTTCACTGTGATTGTTAAAGCAAAAGCTGGAGGGAAGTTGCTTTCTGGTAGCTTAGCCTGGGATGATGGAGTGCATCTGGTGAGGAGCCCCATTGTTGCATTTGCTATTCCATCATGA 2220 46.67 MEYCHGFSFNCRLLLVAFACTLLFTSQAADDRKVYVVYLGKSSEGGFSAASERHANMLQQVLTTSDASKSLVYSYHRSFSGFAARLNEEEAQKLAEMDEVVSVFPSEKKHLHTTRSWDFMGLFERARRTSLESDLVIGMLDTGIWPESKSFSDEGFGPPPAKWKGECQSSSNFTCNNKIIGARFFRSEPLSGEGDILSPRDTEGHGTHTSSTAAGNLVTGASLFGLALGTSRGGAPSARIAVYKICWADGCFDADILAAFDNAIADGVDIISISVGGFIAKNYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLGSITNVSPWSLSVAASTIDRKFVTNVKLGNGESFLGISVNTFQLGEKFFPLIYAGDAPNSTAGFNGSLSRFCFPGSLDVNLVHGKIVFCDEIGDGETALSSGAVGTIMQDAGLQDVAFLFPLPASKLDLNAGKNVFQYLRSTSNPVAIIEKSTTIEDLLAPSVVSFSSRGPNIVTLDILKPDLVAPGVDILASWSEGSTITSLTGDNRIAPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTTAFPMTPKVNTDAEFAYGAGHLNPVNAINPGLVYDAEEIDYIKFLCGQGYSTKNLRLVTGDQSNCSDVTKTAASDLNYPSFALLIKSRRLVTRVYHRTVTNVGLPVSTYKAIIQAPTGLEVTVRPATLSFSSLGQKISFTVIVKAKAGGKLLSGSLAWDDGVHLVRSPIVAFAIPS 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1824742 1832536 - Tan0016941.1 Tan04g0233 748637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0233 739 CDD PA_subtilisin_like 338 462 - -
Tan04g0233 739 ProSiteProfiles Serine proteases, subtilase domain profile. 116 591 - -
Tan04g0233 739 Pfam Peptidase inhibitor I9 34 112 IPR010259 -
Tan04g0233 739 Pfam Fibronectin type-III domain 638 733 IPR041469 -
Tan04g0233 739 Gene3D - 332 469 - -
Tan04g0233 739 SUPERFAMILY Subtilisin-like 111 595 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g0233 739 Gene3D Peptidase S8/S53 domain 134 604 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g0233 739 Pfam Subtilase family 134 583 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan04g0233 739 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Tan04g0233 739 CDD Peptidases_S8_3 109 565 IPR034197 -
Tan04g0233 739 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 112 IPR037045 -
Tan04g0233 739 FunFam Subtilisin-like protease SBT1.5 134 344 - -
Tan04g0233 739 FunFam Subtilisin-like protease SBT5.3 24 112 - -
Tan04g0233 739 Gene3D - 608 736 - -
Tan04g0233 739 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 733 IPR045051 -
Tan04g0233 739 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Tan04g0233 739 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Tan04g0233 739 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0233 Tan-Chr4:1824742 Tan04g0241 Tan-Chr4:1952763 6.60E-240 dispersed
Tan04g0233 Tan-Chr4:1824742 Tan04g0234 Tan-Chr4:1835532 3.10E-242 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0233 - - - 0.0