Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0312 ATGGAGGGTTTTGTGAGGCTTTTGGGTTTGGCAAAGCCATATGTGGCAGTTCTTTTTGTGCAGTTTGGATATGCTGGATTGGCCATTCTTGCAAAGTCAGCTTTGGACAAGGGGATGAGCCAATATGTTTTCGCCGTTTATCGTCAAATTGTTGCTACTCTTGTCATGGCTCCTTTTGCTATTGTCTTTGAAAGGAAAGTGAGGCCGAAGATGACCTTTTCGTTGTTCTTCAAGATTGTGATGCTGGGTTTATTAGAGCCCGTGATGGATCAAAACTTGTACTATACTGGTATGAAGTTCACAACAGCAACCTTTACAGCTGCCATGAGCAATATTCTACCAGCTTTTACTTTCCTCATGGCTTGGGCTTGGAGGCTTGAGAAAGTGAATATTTTGAAAAGGAGAAGCCAAGCAAAAATATTAGGAACCATTGTGACAGTAGGAGGAGCCATGATTATGACCTTCATAAGAGGGCCAATGTTGAATCTGCCATGGACAAAAGCCAACCAGCTCTCAGCTGCTTCTAATTCAGGTGGTTCTGCAAATCACCAAAGCCATCTCAAGGGCTCACTCATGATTGTAACTGCCTGCATTTGCTGGTCAGCTTTCATCACTCTTCAGGCGATTACATTGAAATCGTACCCGGCAGAGCTGTCGCTTACGGTGTTGATATGCTTGGTGGGCGCCATTGGAGACTCTGGGGTGGCTTTGTTCATGGAAAGGGGAAACCCTACTGCTTGGTCTTTACACTTTGACCGTCAGCTTCTGGCTATTGTTTATGCTGGAGTAATAAGTACAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGACCTGTTTTTGTGACAGCATTCAATCCTCTGAGCATGATTCTTGTTGCAATCATGAGCTCCTTCATTTTGTCTGAGATAATGTTCTTGGGCAGGATTATTGGAGCAGTGGTCATAATCACTGGCTTGTACATGGTTTTGTGGGGCAAAAGCAAAGATCAACCTTCAGTTAATTCAGACTGCGATAAGATAACACCTTGTGAGCAACAAATGACTGGATCAAAGGATGAGGCTTCGACGACGATTCAATCAAATGAAGAATTCATGGTGGTTGATGTTGCCAAAGAGGAGATAAATTGA 1140 43.33 MEGFVRLLGLAKPYVAVLFVQFGYAGLAILAKSALDKGMSQYVFAVYRQIVATLVMAPFAIVFERKVRPKMTFSLFFKIVMLGLLEPVMDQNLYYTGMKFTTATFTAAMSNILPAFTFLMAWAWRLEKVNILKRRSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKANQLSAASNSGGSANHQSHLKGSLMIVTACICWSAFITLQAITLKSYPAELSLTVLICLVGAIGDSGVALFMERGNPTAWSLHFDRQLLAIVYAGVISTGVTYYIQGVVMQTKGPVFVTAFNPLSMILVAIMSSFILSEIMFLGRIIGAVVIITGLYMVLWGKSKDQPSVNSDCDKITPCEQQMTGSKDEASTTIQSNEEFMVVDVAKEEIN 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2530268 2535513 + Tan0015223.1 Tan04g0312 748716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0312 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Tan04g0312 379 PANTHER WAT1-RELATED PROTEIN 15 345 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan04g0312 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 332 - -
Tan04g0312 379 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020(InterPro)
Tan04g0312 379 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0312 Tan-Chr4:2530268 Tan04g0315 Tan-Chr4:2556353 2.50E-171 dispersed
Tan04g0312 Tan-Chr4:2530268 Tan04g0313 Tan-Chr4:2530268 4.20E-206 tandem
Tan11g0761 Tan-Chr11:6419484 Tan04g0312 Tan-Chr4:2530268 1.30E-103 wgd
Tan03g0990 Tan-Chr3:66319681 Tan04g0312 Tan-Chr4:2530268 1.00E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0312 - - - 0.0