Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0313 ATGGAGGGTTTTGTGAGGCTTTTGGGTTTGGCAAAGCCATATGTGGCAGTTCTTTTTGTGCAGTTTGGATATGCTGGATTGGCCATTCTTGCAAAGTCAGCTTTGGACAAGGGGATGAGCCAATATGTTTTCGCCGTTTATCGTCAAATTGTTGCTACTCTTGTCATGGCTCCTTTTGCTATTGTCTTTGAAAGTCTTGCATGCAGGAAAGTGAGGCCGAAGATGACCTTTTCGTTGTTCTTCAAGATTGTGATGCTGGGTTTATTAGAGCCCGTGATGGATCAAAACTTGTACTATACTGGTATGAAGTTCACAACAGCAACCTTTACAGCTGCCATGAGCAATATTCTACCAGCTTTTACTTTCCTCATGGCTTGGGCTTGGAGGCTTGAGAAAGTGAATATTTTGAAAAGGAGAAGCCAAGCAAAAATATTAGGAACCATTGTGACAGTAGGAGGAGCCATGATTATGACCTTCATAAGAGGGCCAATGTTGAATCTGCCATGGACAAAAGCCAACCAGCTCTCAGCTGCTTCTAATTCAGGTGGTTCTGCAAATCACCAAAGCCATCTCAAGGGCTCACTCATGATTGTAACTGCCTGCATTTGCTGGTCAGCTTTCATCACTCTTCAGGCGATTACATTGAAATCGTACCCGGCAGAGCTGTCGCTTACGGTGTTGATATGCTTGGTGGGCGCCATTGGAGACTCTGGGGTGGCTTTGTTCATGGAAAGGGGAAACCCTACTGCTTGGTCTTTACACTTTGACCGTCAGCTTCTGGCTATTGTTTATGCTGGAGTAATAAGTACAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGACCTGTTTTTGTGACAGCATTCAATCCTCTGAGCATGATTCTTGTTGCAATCATGAGCTCCTTCATTTTGTCTGAGATAATGTTCTTGGGCAGGATTATTGGAGCAGTGGTCATAATCACTGGCTTGTACATGGTTTTGTGGGGCAAAAGCAAAGATCAACCTTCAGTTAATTCAGACTGCGATAAGATAACACCTTGTGAGCAACAAATGACTGGATCAAAGGATGAGGCTTCGACGACGATTCAATCAAATGAAGAATTCATGGTGGTTGATGTTGCCAAAGAGGAGATAAATTGA 1152 43.4 MEGFVRLLGLAKPYVAVLFVQFGYAGLAILAKSALDKGMSQYVFAVYRQIVATLVMAPFAIVFESLACRKVRPKMTFSLFFKIVMLGLLEPVMDQNLYYTGMKFTTATFTAAMSNILPAFTFLMAWAWRLEKVNILKRRSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKANQLSAASNSGGSANHQSHLKGSLMIVTACICWSAFITLQAITLKSYPAELSLTVLICLVGAIGDSGVALFMERGNPTAWSLHFDRQLLAIVYAGVISTGVTYYIQGVVMQTKGPVFVTAFNPLSMILVAIMSSFILSEIMFLGRIIGAVVIITGLYMVLWGKSKDQPSVNSDCDKITPCEQQMTGSKDEASTTIQSNEEFMVVDVAKEEIN 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2530268 2535513 + Tan0015223.2 Tan04g0313 748717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0313 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 336 - -
Tan04g0313 383 PANTHER WAT1-RELATED PROTEIN 15 349 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan04g0313 383 Pfam EamA-like transporter family 14 157 IPR000620 GO:0016020(InterPro)
Tan04g0313 383 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020(InterPro)
Tan04g0313 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 159 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0313 Tan-Chr4:2530268 Tan04g0315 Tan-Chr4:2556353 4.80E-170 dispersed
Tan04g0312 Tan-Chr4:2530268 Tan04g0313 Tan-Chr4:2530268 4.20E-206 tandem
Tan04g0313 Tan-Chr4:2530268 Tan04g0314 Tan-Chr4:2530268 4.80E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0313 - - - 0.0