Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0314 ATGACCTTTTCGTTGTTCTTCAAGATTGTGATGCTGGGTTTATTAGAGCCCGTGATGGATCAAAACTTGTACTATACTGGTATGAAGTTCACAACAGCAACCTTTACAGCTGCCATGAGCAATATTCTACCAGCTTTTACTTTCCTCATGGCTTGGGCTTGGAGGCTTGAGAAAGTGAATATTTTGAAAAGGAGAAGCCAAGCAAAAATATTAGGAACCATTGTGACAGTAGGAGGAGCCATGATTATGACCTTCATAAGAGGGCCAATGTTGAATCTGCCATGGACAAAAGCCAACCAGCTCTCAGCTGCTTCTAATTCAGGTGGTTCTGCAAATCACCAAAGCCATCTCAAGGGCTCACTCATGATTGTAACTGCCTGCATTTGCTGGTCAGCTTTCATCACTCTTCAGGCGATTACATTGAAATCGTACCCGGCAGAGCTGTCGCTTACGGTGTTGATATGCTTGGTGGGCGCCATTGGAGACTCTGGGGTGGCTTTGTTCATGGAAAGGGGAAACCCTACTGCTTGGTCTTTACACTTTGACCGTCAGCTTCTGGCTATTGTTTATGCTGGAGTAATAAGTACAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGACCTGTTTTTGTGACAGCATTCAATCCTCTGAGCATGATTCTTGTTGCAATCATGAGCTCCTTCATTTTGTCTGAGATAATGTTCTTGGGCAGGATTATTGGAGCAGTGGTCATAATCACTGGCTTGTACATGGTTTTGTGGGGCAAAAGCAAAGATCAACCTTCAGTTAATTCAGACTGCGATAAGATAACACCTTGTGAGCAACAAATGACTGGATCAAAGGATGAGGCTTCGACGACGATTCAATCAAATGAAGAATTCATGGTGGTTGATGTTGCCAAAGAGGAGATAAATTGA 930 43.12 MTFSLFFKIVMLGLLEPVMDQNLYYTGMKFTTATFTAAMSNILPAFTFLMAWAWRLEKVNILKRRSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKANQLSAASNSGGSANHQSHLKGSLMIVTACICWSAFITLQAITLKSYPAELSLTVLICLVGAIGDSGVALFMERGNPTAWSLHFDRQLLAIVYAGVISTGVTYYIQGVVMQTKGPVFVTAFNPLSMILVAIMSSFILSEIMFLGRIIGAVVIITGLYMVLWGKSKDQPSVNSDCDKITPCEQQMTGSKDEASTTIQSNEEFMVVDVAKEEIN 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2530268 2535513 + Tan0015223.3 Tan04g0314 748718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0314 309 PANTHER WAT1-RELATED PROTEIN 1 275 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan04g0314 309 SUPERFAMILY Multidrug resistance efflux transporter EmrE 178 262 - -
Tan04g0314 309 Pfam EamA-like transporter family 118 257 IPR000620 GO:0016020(InterPro)
Tan04g0314 309 SUPERFAMILY Multidrug resistance efflux transporter EmrE 7 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0314 Tan-Chr4:2530268 Tan04g0316 Tan-Chr4:2571905 1.90E-132 dispersed
Tan04g0313 Tan-Chr4:2530268 Tan04g0314 Tan-Chr4:2530268 4.80E-170 tandem
Tan04g0314 Tan-Chr4:2530268 Tan04g0315 Tan-Chr4:2556353 5.50E-140 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0314 - - - 0.0