Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0316 ATGGAGGGTTTAATGAGGTTTTTGGGTTTGGCAAAACCATATGTGGGAATTGTATTTATGCAGTTTGGTTATGCTGGATTGGCAATTCTTGGAAAGTCGGCTATGGACAAAGGGATGAGCCAATATGTTTTTGTGCTTTATCGTCAAGCTATTGCTACTCTTCTCATTGCCCCTTTTGCCATTGTCTTTGACAGGGAAGCAAGGACAAAGATGACCTTTTCGTTGTTCTTCAGGATTCTGATGTTGGGTTTATTAGAGCCGGTGATTGATCAAAACTTGTACTATGCTGGTATGAAGATGGCAACAGCAACCTTTGCAGCTGCCATGTGCAATGTGCTACCAGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATCCTAGGAACTATTGTGACAGTTGGAGGAGCCATGGTTATGACCTTCATAAGAGGGCCAATGTTGAATCTGCCATGGACAAAATCCAACCAGCACTCTTCTTTTTCAAGTGAAGCTGCAAATCACCAAAGCCCACTTAAGGGCTGCCTCATGATCGCAACTGGCTGCATTTGCTGGTCATCTTTCACCACTCTTCAGGCGATTACATTGAAAGCATACCCGGCAGAGTTGTCCCTTACGGCATTGATATGCTTGGTGGGCACCATTGGAGACTCTGGAGTGGCTTTGATCATGGAGAGGGGGAACCCAGCTGCTTGGGCTTTGCACTTTGACAGTCAGCTTCTGGCTGTTGTTTATACTGGAGTAATATGCTCAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGACCTGTTTTTGCGACTGCATTCGTTCCTCTGAGCCTGGTTCTTGTTGCAATTATTAGCTCCTTCATCTTGTCTGAGATAATGTACTTGGGCAGAATTATTGGAGCAGTGGTCATAATCATTGGCTTGTACCTGCTTTTGTGGGGCAAAAGCAAAGATCAGCTCCCAGTTAAACAAGAATGTGATAACATAACACTTTGTGAGCAACAAATGACTGGAAAGGATGAGGCTTTGAAGACGATTCAATCGAACAAGGAAGTTGTGGTGCTTGATGTTGCCAAAGAGGAGACAAATTGA 1131 43.94 MEGLMRFLGLAKPYVGIVFMQFGYAGLAILGKSAMDKGMSQYVFVLYRQAIATLLIAPFAIVFDREARTKMTFSLFFRILMLGLLEPVIDQNLYYAGMKMATATFAAAMCNVLPAFAFLMAWACRLEKVNILKRGSQAKILGTIVTVGGAMVMTFIRGPMLNLPWTKSNQHSSFSSEAANHQSPLKGCLMIATGCICWSSFTTLQAITLKAYPAELSLTALICLVGTIGDSGVALIMERGNPAAWALHFDSQLLAVVYTGVICSGVTYYIQGVVMQTKGPVFATAFVPLSLVLVAIISSFILSEIMYLGRIIGAVVIIIGLYLLLWGKSKDQLPVKQECDNITLCEQQMTGKDEALKTIQSNKEVVVLDVAKEETN 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2571905 2574289 + Tan0008556.1 Tan04g0316 748720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0316 376 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020(InterPro)
Tan04g0316 376 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020(InterPro)
Tan04g0316 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Tan04g0316 376 PANTHER WAT1-RELATED PROTEIN 16 339 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan04g0316 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0314 Tan-Chr4:2530268 Tan04g0316 Tan-Chr4:2571905 1.90E-132 dispersed
Tan04g0316 Tan-Chr4:2571905 Tan11g0765 Tan-Chr11:6466453 5.00E-111 dispersed
Tan04g0315 Tan-Chr4:2556353 Tan04g0316 Tan-Chr4:2571905 4.70E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0316 - - - 0.0