Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g0329 | ATGGTGGGCTCTGAGGAGGACTCTGGTACTTCTGGGGCCGCGGTGCAGCTTTCTGGTGGCAGTCGGAAATTGTTCTGGCGCTCGGCCTCATGGTCTGCGTCACGTTCCTCCCTTCACCATCCCGAAGTCAACAAAGATGGTGGAGACCCCAATGGGAATCTTGGTGATAGTAATGGACCGAGCCGGATTTTCCCCGCTCCATTAACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCCTTACAGCCCCTGTCGATAGCCCGGCGAAGCTTGGATGAATGGCCAAAGGCGGGGTCGGACGATATAGGCGAGTGGCCGCAACCTCCTACTCCAAGTGGTAGAGGAAATGGTGAGAGGTTGAAACTTGATTTGTCGACAATTCAGAGAAACCCGGATAAGAATTGTGGGCTTGTGAAAAGGGATAAGATTGCTTTTTTCGACAAAGAATGTTCAAAAGTGGCAGAACATGTATATCTTGGTGGTGATGCCGTTGCTCGAGATAGGGATATACTTAAACAGAATGGAATTACTCATGTGTTGAATTGTGTAGGTTTCGTTTGCCCGGAGTACTTCAAAGATGATTTTGTGTACAGAACTTTGTGGTTGCAGGATAGCCCTTCTGAGGATATTACTAGTATTCTTTACGATGTTTTTGACTACTTTGAAGATGTTAGAGAGCAAAGTGGAAGGGTTTTTGTTCATTGTTGCCAGGGAGTATCTCGGTCCACGTCGTTGGTGATTGCCTATCTGATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTGAAGGCAGCAAGAGGTATTGCTGACCCGAATATGGGTTTTGCTTGCCAGTTATTACAGTGCCAAAAGAGGGTCCATGCTTTCCCTCTTAGCCCAAGTTCACTGTTGAGGATGTATAGAGTTGCCCCACACTCACCATATGATCCTTTGCATCTGGTCCCCAAAATGTTGAATGATCCTTCACCCTCTGCTCTGGATTCTAGAGGTGCATTTATCATTCATATACCATCTGCCATATTTGTTTGGATTGGTAAGAACTGTGAAGCAATCATGGAAAGGGATGCAAGGGGAGCTGTTGTGCAGATTGTTCGGTATGAGAGAGTGCAAGGACCTATATATGTAATTAAGGAAGGGGAAGAACCAACAAACTTTTGGGATTCTTTTGCAAATCTGTTACCTTTAATGGATAGGTCCAACAGTAAAATCAATCTTGGGGAATTGAAAGGTAAGCCTTACCCAGGCGAGAGGAAAGTTGATTCCTATGATGTGGATTTTGAAATTTTTCAGAAGGCTATTACTGGTGGTTTTGTTCCTCCATTTCCTTCATCTGAGAACGAGCATGAAACCCATCTTCCTGTTAGAGAAAGCAGTTGGAGTATGCTTAGGCGTAAGTTTGCCTCTGGGAATATGAAAGATTTTGTATCAGCTCCTCGAATATCTCTCTCTAGGGTCTATTCAGACTCGTTGATGATAGTGCATTTTTCTGCAAAATCTTCATCGCCTTCTGCATTTTCTTTGTCTTCATCATCTTCTTCACCTATCTATCTTTCTCCAGACTCCCTCTCTTCTGATTCAAGTTCAAATTCAAGTTCAAGTTCCAAGTATTTTTCAGAATCCTCTTTAGATTCTCCTTCTGCATCTTCACCTTCAGTTCCAGTTTCTTCATCTCTATCTAGTTTTTCTAACATGTCTCTTATCTCATCCAATAGTTCCTTAGAATCTGTGTCCAATGGTCCAGAAACTCGTGATGCAGTCCCTTTGGAATCAAGTTCTCATTCATTCTCATTCCCATCCAAAAAGTTCTCACCTTCTCTTGCAGAACGCAGAGGTACTGCAAAATCTCTGACATTGCCTACAATGCCTAGTAAAATCAGAGCAACAAATAGTACCTCAAGGTTTCTTGCAACTCAAGAAGATGGTAAGAGGAAAAACAAGATTTCTTGCTCTCTTAATGTATCAATTAATATGAAAAATGGGTCAGAGCCTATGGATAGGGTTGTAAATGAACAGACAAGTTCCACTCAGAATTTCAAGAATATTGAAAACGGAATGGATATAAGGGTAGGTAGTGTGGCCTCGTGTCAGCGGGAAACTCAAGTTGATGGACAATCTACTAGTTCATGGAAAAGCTATCCCAAACTTTTTGAAGAAGGCATGGTATCCACTGTGTCAAATGGGAAGCAAGATGGCGAGTTGGTCCAACCTATGGTATACTGTTGGCCGGAGTTAGAAAAGATTGCAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTATAGTGATTTTCTCTCCAAGTTCAAGTGAAGAGGGATAA | 2340 | 42.95 | MVGSEEDSGTSGAAVQLSGGSRKLFWRSASWSASRSSLHHPEVNKDGGDPNGNLGDSNGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSTIQRNPDKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQSGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRVAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPTNFWDSFANLLPLMDRSNSKINLGELKGKPYPGERKVDSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSMLRRKFASGNMKDFVSAPRISLSRVYSDSLMIVHFSAKSSSPSAFSLSSSSSSPIYLSPDSLSSDSSSNSSSSSKYFSESSLDSPSASSPSVPVSSSLSSFSNMSLISSNSSLESVSNGPETRDAVPLESSSHSFSFPSKKFSPSLAERRGTAKSLTLPTMPSKIRATNSTSRFLATQEDGKRKNKISCSLNVSINMKNGSEPMDRVVNEQTSSTQNFKNIENGMDIRVGSVASCQRETQVDGQSTSSWKSYPKLFEEGMVSTVSNGKQDGELVQPMVYCWPELEKIAAFDTSYLNSKAAIVIFSPSSSEEG | 779 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2691300 | 2696842 | - | Tan0012927.2 | Tan04g0329 | 748733 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g0329 | 779 | MobiDBLite | consensus disorder prediction | 33 | 70 | - | - | |
Tan04g0329 | 779 | Gene3D | Severin | 304 | 399 | IPR029006 | - | |
Tan04g0329 | 779 | CDD | DSP | 154 | 288 | - | - | |
Tan04g0329 | 779 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 237 | 247 | IPR016130 | GO:0016311(InterPro) | |
Tan04g0329 | 779 | MobiDBLite | consensus disorder prediction | 578 | 621 | - | - | |
Tan04g0329 | 779 | MobiDBLite | consensus disorder prediction | 100 | 120 | - | - | |
Tan04g0329 | 779 | SUPERFAMILY | Actin depolymerizing proteins | 300 | 401 | - | - | |
Tan04g0329 | 779 | Pfam | Dual specificity phosphatase, catalytic domain | 161 | 291 | IPR000340 | GO:0016311(InterPro) | |
Tan04g0329 | 779 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 153 | 295 | IPR020422 | GO:0006470(InterPro) | |
Tan04g0329 | 779 | PANTHER | MKPA PROTEIN | 14 | 773 | - | - | |
Tan04g0329 | 779 | SMART | VILL_6 | 302 | 399 | IPR007122 | GO:0051015(InterPro) | |
Tan04g0329 | 779 | MobiDBLite | consensus disorder prediction | 578 | 608 | - | - | |
Tan04g0329 | 779 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 148 | 294 | IPR029021 | - | |
Tan04g0329 | 779 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 212 | 273 | IPR000387 | GO:0016311(InterPro) | |
Tan04g0329 | 779 | SMART | dsp_5 | 153 | 292 | IPR020422 | GO:0006470(InterPro) | |
Tan04g0329 | 779 | Gene3D | Protein tyrosine phosphatase superfamily | 140 | 295 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0329 | Tan-Chr4:2691300 | Tan04g0331 | Tan-Chr4:2691756 | 0.00E+00 | dispersed | |
Tan04g0328 | Tan-Chr4:2691300 | Tan04g0329 | Tan-Chr4:2691300 | 0.00E+00 | tandem | |
Tan04g0329 | Tan-Chr4:2691300 | Tan04g0330 | Tan-Chr4:2691300 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g0329 | - | - | - | 0.0 |