Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0339 ATGACCATTGAAGTTGCTGCCAAGGCTGCCGTTGGTGCACCCAATGTTATTGGAGACTGCCCTTTCACCCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACAAGTTGCATCTCATCAATCTCTCTAACAAACCCTGTTGGTTCTTGAAAGTGAGTCCAGAAGGGAAGGTGCCGGTGGCAAAGATTGATTGTCAATGGGTTCCTGATTCTGATGTCATTGTGAGGATTCTTGAGGAGAAGTTTCCAAAGCCTTCTCTTGTTACTCCCCCTCAATTTTCTTCTGTGGGATCGAAAATAGGTGCTGCTTTTGGAAAATTCTTGAAGAGCAAGGACCCGAATGATTGTTTGGAGCGGGCTTTGCTTGAAGAGCTGAAGGCGTTGGACAATCATCTCAAGGCTCATGGTCCTTATGTCGCTGGAGAGAAGGTAACTGCTATTGATTTGAATCTGGCACCAAAGTTGTACCATCTTGATATTGCTCTTTGCCATTTCAAGAAGTGGACTTTCCCCAAAAACTTAACCTATTTATCTGCATACAAAAAGTTGCTTTTTGCTCGAAAATCTTTCGTGAAGACGAAGGCCGCCCCAGAACATATAATCTCGGGTTGGGAGGCCAAGGTGAATGCTGCATGA 642 44.7 MTIEVAAKAAVGAPNVIGDCPFTQRVLLTLEEKKVPYKLHLINLSNKPCWFLKVSPEGKVPVAKIDCQWVPDSDVIVRILEEKFPKPSLVTPPQFSSVGSKIGAAFGKFLKSKDPNDCLERALLEELKALDNHLKAHGPYVAGEKVTAIDLNLAPKLYHLDIALCHFKKWTFPKNLTYLSAYKKLLFARKSFVKTKAAPEHIISGWEAKVNAA 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2756110 2759201 - Tan0004670.1 Tan04g0339 748743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0339 213 Gene3D - 90 212 - -
Tan04g0339 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 212 - -
Tan04g0339 213 SFLD Glutathione Transferase (cytosolic) 19 182 IPR040079 -
Tan04g0339 213 Gene3D Glutaredoxin 1 89 - -
Tan04g0339 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 209 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Tan04g0339 213 CDD GST_N_family 20 81 - -
Tan04g0339 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Tan04g0339 213 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Tan04g0339 213 SUPERFAMILY Thioredoxin-like 19 86 IPR036249 -
Tan04g0339 213 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Tan04g0339 213 Pfam Glutathione S-transferase, C-terminal domain 122 181 - -
Tan04g0339 213 SFLD Main (cytGST) 19 182 - -
Tan04g0339 213 SUPERFAMILY GST C-terminal domain-like 101 209 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0339 Tan-Chr4:2756110 Tan04g2034 Tan-Chr4:73261316 1.30E-71 dispersed
Tan04g0339 Tan-Chr4:2756110 Tan04g0340 Tan-Chr4:2762953 1.00E-100 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0339 K21888 - csv:101203666 342.428