Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g0339 | ATGACCATTGAAGTTGCTGCCAAGGCTGCCGTTGGTGCACCCAATGTTATTGGAGACTGCCCTTTCACCCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACAAGTTGCATCTCATCAATCTCTCTAACAAACCCTGTTGGTTCTTGAAAGTGAGTCCAGAAGGGAAGGTGCCGGTGGCAAAGATTGATTGTCAATGGGTTCCTGATTCTGATGTCATTGTGAGGATTCTTGAGGAGAAGTTTCCAAAGCCTTCTCTTGTTACTCCCCCTCAATTTTCTTCTGTGGGATCGAAAATAGGTGCTGCTTTTGGAAAATTCTTGAAGAGCAAGGACCCGAATGATTGTTTGGAGCGGGCTTTGCTTGAAGAGCTGAAGGCGTTGGACAATCATCTCAAGGCTCATGGTCCTTATGTCGCTGGAGAGAAGGTAACTGCTATTGATTTGAATCTGGCACCAAAGTTGTACCATCTTGATATTGCTCTTTGCCATTTCAAGAAGTGGACTTTCCCCAAAAACTTAACCTATTTATCTGCATACAAAAAGTTGCTTTTTGCTCGAAAATCTTTCGTGAAGACGAAGGCCGCCCCAGAACATATAATCTCGGGTTGGGAGGCCAAGGTGAATGCTGCATGA | 642 | 44.7 | MTIEVAAKAAVGAPNVIGDCPFTQRVLLTLEEKKVPYKLHLINLSNKPCWFLKVSPEGKVPVAKIDCQWVPDSDVIVRILEEKFPKPSLVTPPQFSSVGSKIGAAFGKFLKSKDPNDCLERALLEELKALDNHLKAHGPYVAGEKVTAIDLNLAPKLYHLDIALCHFKKWTFPKNLTYLSAYKKLLFARKSFVKTKAAPEHIISGWEAKVNAA | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2756110 | 2759201 | - | Tan0004670.1 | Tan04g0339 | 748743 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g0339 | 213 | Gene3D | - | 90 | 212 | - | - | |
Tan04g0339 | 213 | FunFam | Glutathione S-transferase DHAR3, chloroplastic | 90 | 212 | - | - | |
Tan04g0339 | 213 | SFLD | Glutathione Transferase (cytosolic) | 19 | 182 | IPR040079 | - | |
Tan04g0339 | 213 | Gene3D | Glutaredoxin | 1 | 89 | - | - | |
Tan04g0339 | 213 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 3 | 209 | IPR044627 | GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro) | |
Tan04g0339 | 213 | CDD | GST_N_family | 20 | 81 | - | - | |
Tan04g0339 | 213 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 10 | 88 | IPR004045 | - | |
Tan04g0339 | 213 | Pfam | Glutathione S-transferase, N-terminal domain | 20 | 82 | IPR004045 | - | |
Tan04g0339 | 213 | SUPERFAMILY | Thioredoxin-like | 19 | 86 | IPR036249 | - | |
Tan04g0339 | 213 | FunFam | Glutathione S-transferase DHAR3 chloroplastic | 1 | 89 | - | - | |
Tan04g0339 | 213 | Pfam | Glutathione S-transferase, C-terminal domain | 122 | 181 | - | - | |
Tan04g0339 | 213 | SFLD | Main (cytGST) | 19 | 182 | - | - | |
Tan04g0339 | 213 | SUPERFAMILY | GST C-terminal domain-like | 101 | 209 | IPR036282 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0339 | Tan-Chr4:2756110 | Tan04g2034 | Tan-Chr4:73261316 | 1.30E-71 | dispersed | |
Tan04g0339 | Tan-Chr4:2756110 | Tan04g0340 | Tan-Chr4:2762953 | 1.00E-100 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g0339 | K21888 | - | csv:101203666 | 342.428 |