Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g0340 | ATGGTTCTCGAAGCTGCAGTCAAGGCTGCCGTTGGCGCACCCGATGTTATTGGGGACTGCCCTTTCAGCCACAGGGTTCTGTTAACTTTAGAGGAGAAGAAACTTGCTTACAAACTGCATCTCATCAATCTCTCTGCTAAACCCAGTTGGTTCTTGGAAGTGAGCCCTGGAGGGAAGGTGCCAGTGGTGAAGTTTGATGACAAATGGGTTCCTGATTCTGATGTCATTGTGAAGACTCTTGAGGAGAAGTACCCTGAGCCTTCTCTTGTGACTCCTCCTGAATTTTCTTCTGTGGGATCAAAGATATTTGATACTTTTGTAAAGTTCTTGAAGAGCAAGGACCCGAATGATGGTTCAGAGCAGGCTCTACTTAAAGAGTTGAAGGCGTTCGACGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAAAAGGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACCATGTTGATGTCGCTCTCTGCCATTTTAAGAAGTGGGCTATCCCCAAAGACTTGGCCAGTTTAATTGCCTACAAAGAGTTGCTTTTTGCTCGAGAATCTTTCGTGAAGACGAAGGCTGCTCCGGAACATATAATTGCTGGATGGGAGCCCAAGTTCCCCACCTTCCCCTTCGATCAGAAAATGGCCATTGAGGTTGCAGTCAAGGCTGCTGCTGGTGCACCCGATATTCTTGGAGACTGTCCTTTCACCCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACAAATTGCATCTCATCAATTTATCCGACAAACCCACTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAAGTGCCTGTGGTGAAGTTTGATGACAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCTCTTGTGACTCCTCCTGAATTTTCTTCTGTGGGATCAAAGATAAATGGTGCTTTTGTAAAATTCTTGAAGAGCAAGGACCCAACTGATGGTTCAGAGCAGGCTTTGCATGAAGAGTTGAAGGCATTGGATGAGCATCTTAAGGCTCGTGGTCCTTATGTTGCTGGAGAGAAGCTCACTGCCGTTGATTTGAGTCTGGCACCGAAGTTGTACCATCTTGATATTGCTCTTGGCCATTTCAAGAAGTGGGCTTTCCCCGAAAACTTAACCAGTTTATCTAAATACAAAGAGTTGCTTTTCGCTCGAGAATCTTTTGTGAATACGAAGGCTTCCCCAGAACATGTAATTTCTGGTTGGGAGCCCAAGGTGAATGCTGCTGCAGAACATGTAATTTCTCATTCGGAGCCCAAGGCCATTGAGGTTGCTGTCAAGGCTGCTGCTGGTGCACCCGATGTCATTGGAGACTGCCCTTTCACCCAGAGAGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACAAATGGCATCTCATCAATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCAGTGGCGAAGATTGATGACAAATGGGTTCCTGACTCCGATGTCATTGTGGGGATTCTTGAGAAGAAGTATCCAGAGCCTTTTCTTGTGACTCCTCCTGAACTTTCTTCTGTGGGATCAAAGATAAATGGTGCTTTTGTAAAATTCTTGAAGAGCAAGGACCCGAATGATGGTTCAGAGCAGGCTTTGCTTGAAGAGTTGAAGGCGTTGGACGAGCATCTCAAGGCTCATGGTCCTTATGTTGCTGGAGAGAAGGTTACTGCGGTTGATTTGAGTCTGGCACCGAAGTTGTACCATCTTGATGTTGCACTTGGCCATTTCAAGAAGTGGACTTTCCCCGAAACCTTAACTAGTTTATCCGCATACAAAGAGTTGCTTTTCGCTCGAGAATCTTTTGTGAAGACAAAGGCTGCCCCCGAACATGTAATTTCTGGTTGGGAGCCCAAGGTGAATGCTGCATGA | 1965 | 46.11 | MVLEAAVKAAVGAPDVIGDCPFSHRVLLTLEEKKLAYKLHLINLSAKPSWFLEVSPGGKVPVVKFDDKWVPDSDVIVKTLEEKYPEPSLVTPPEFSSVGSKIFDTFVKFLKSKDPNDGSEQALLKELKAFDEHLKAHGPYVAGEKVTAVDLSLAPKLYHVDVALCHFKKWAIPKDLASLIAYKELLFARESFVKTKAAPEHIIAGWEPKFPTFPFDQKMAIEVAVKAAAGAPDILGDCPFTQRVLLTLEEKKVPYKLHLINLSDKPTWFLEVSPEGKVPVVKFDDKWVPDSDVIVGILEEKYPEPSLVTPPEFSSVGSKINGAFVKFLKSKDPTDGSEQALHEELKALDEHLKARGPYVAGEKLTAVDLSLAPKLYHLDIALGHFKKWAFPENLTSLSKYKELLFARESFVNTKASPEHVISGWEPKVNAAAEHVISHSEPKAIEVAVKAAAGAPDVIGDCPFTQRVLLTLEEKKVPYKWHLINLSDKPSWFLEVSPEGKVPVAKIDDKWVPDSDVIVGILEKKYPEPFLVTPPELSSVGSKINGAFVKFLKSKDPNDGSEQALLEELKALDEHLKAHGPYVAGEKVTAVDLSLAPKLYHLDVALGHFKKWTFPETLTSLSAYKELLFARESFVKTKAAPEHVISGWEPKVNAA | 654 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2762953 | 2776830 | - | Tan0014543.1 | Tan04g0340 | 748744 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g0340 | 654 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 66 | 215 | IPR010987 | - | |
Tan04g0340 | 654 | Pfam | Glutathione S-transferase, N-terminal domain | 20 | 82 | IPR004045 | - | |
Tan04g0340 | 654 | Pfam | Glutathione S-transferase, N-terminal domain | 238 | 300 | IPR004045 | - | |
Tan04g0340 | 654 | Pfam | Glutathione S-transferase, N-terminal domain | 461 | 523 | IPR004045 | - | |
Tan04g0340 | 654 | FunFam | Glutathione S-transferase DHAR3 chloroplastic | 219 | 307 | - | - | |
Tan04g0340 | 654 | Gene3D | - | 90 | 211 | - | - | |
Tan04g0340 | 654 | Gene3D | - | 531 | 653 | - | - | |
Tan04g0340 | 654 | Gene3D | - | 308 | 430 | - | - | |
Tan04g0340 | 654 | SUPERFAMILY | GST C-terminal domain-like | 543 | 651 | IPR036282 | - | |
Tan04g0340 | 654 | FunFam | Glutathione S-transferase DHAR3 chloroplastic | 1 | 89 | - | - | |
Tan04g0340 | 654 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 284 | 430 | IPR010987 | - | |
Tan04g0340 | 654 | Gene3D | Glutaredoxin | 442 | 530 | - | - | |
Tan04g0340 | 654 | Gene3D | Glutaredoxin | 1 | 89 | - | - | |
Tan04g0340 | 654 | SUPERFAMILY | GST C-terminal domain-like | 84 | 211 | IPR036282 | - | |
Tan04g0340 | 654 | CDD | GST_N_family | 238 | 295 | - | - | |
Tan04g0340 | 654 | SFLD | Main (cytGST) | 237 | 392 | - | - | |
Tan04g0340 | 654 | SFLD | Main (cytGST) | 460 | 617 | - | - | |
Tan04g0340 | 654 | SFLD | Main (cytGST) | 19 | 166 | - | - | |
Tan04g0340 | 654 | FunFam | Glutathione S-transferase DHAR3, chloroplastic | 90 | 212 | - | - | |
Tan04g0340 | 654 | SUPERFAMILY | Thioredoxin-like | 237 | 305 | IPR036249 | - | |
Tan04g0340 | 654 | SUPERFAMILY | Thioredoxin-like | 19 | 87 | IPR036249 | - | |
Tan04g0340 | 654 | SFLD | Glutathione Transferase (cytosolic) | 460 | 617 | IPR040079 | - | |
Tan04g0340 | 654 | SFLD | Glutathione Transferase (cytosolic) | 19 | 166 | IPR040079 | - | |
Tan04g0340 | 654 | SFLD | Glutathione Transferase (cytosolic) | 237 | 392 | IPR040079 | - | |
Tan04g0340 | 654 | SUPERFAMILY | GST C-terminal domain-like | 316 | 428 | IPR036282 | - | |
Tan04g0340 | 654 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 444 | 650 | IPR044627 | GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro) | |
Tan04g0340 | 654 | FunFam | Glutathione S-transferase DHAR3, chloroplastic | 308 | 430 | - | - | |
Tan04g0340 | 654 | CDD | GST_N_family | 20 | 81 | - | - | |
Tan04g0340 | 654 | FunFam | Glutathione S-transferase DHAR3, chloroplastic | 531 | 653 | - | - | |
Tan04g0340 | 654 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 451 | 529 | IPR004045 | - | |
Tan04g0340 | 654 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 10 | 88 | IPR004045 | - | |
Tan04g0340 | 654 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 525 | 653 | IPR010987 | - | |
Tan04g0340 | 654 | Gene3D | Glutaredoxin | 217 | 306 | - | - | |
Tan04g0340 | 654 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 228 | 306 | IPR004045 | - | |
Tan04g0340 | 654 | SUPERFAMILY | Thioredoxin-like | 460 | 528 | IPR036249 | - | |
Tan04g0340 | 654 | CDD | GST_N_family | 461 | 518 | - | - | |
Tan04g0340 | 654 | Pfam | Glutathione S-transferase, C-terminal domain | 561 | 623 | - | - | |
Tan04g0340 | 654 | Pfam | Glutathione S-transferase, C-terminal domain | 120 | 175 | - | - | |
Tan04g0340 | 654 | Pfam | Glutathione S-transferase, C-terminal domain | 336 | 389 | - | - | |
Tan04g0340 | 654 | FunFam | Glutathione S-transferase DHAR3 chloroplastic | 442 | 530 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0340 | Tan-Chr4:2762953 | Tan04g2034 | Tan-Chr4:73261316 | 7.70E-75 | dispersed | |
Tan04g0339 | Tan-Chr4:2756110 | Tan04g0340 | Tan-Chr4:2762953 | 1.00E-100 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g0340 | K21888 | - | csv:101203666 | 373.244 |