Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0340 ATGGTTCTCGAAGCTGCAGTCAAGGCTGCCGTTGGCGCACCCGATGTTATTGGGGACTGCCCTTTCAGCCACAGGGTTCTGTTAACTTTAGAGGAGAAGAAACTTGCTTACAAACTGCATCTCATCAATCTCTCTGCTAAACCCAGTTGGTTCTTGGAAGTGAGCCCTGGAGGGAAGGTGCCAGTGGTGAAGTTTGATGACAAATGGGTTCCTGATTCTGATGTCATTGTGAAGACTCTTGAGGAGAAGTACCCTGAGCCTTCTCTTGTGACTCCTCCTGAATTTTCTTCTGTGGGATCAAAGATATTTGATACTTTTGTAAAGTTCTTGAAGAGCAAGGACCCGAATGATGGTTCAGAGCAGGCTCTACTTAAAGAGTTGAAGGCGTTCGACGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAAAAGGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACCATGTTGATGTCGCTCTCTGCCATTTTAAGAAGTGGGCTATCCCCAAAGACTTGGCCAGTTTAATTGCCTACAAAGAGTTGCTTTTTGCTCGAGAATCTTTCGTGAAGACGAAGGCTGCTCCGGAACATATAATTGCTGGATGGGAGCCCAAGTTCCCCACCTTCCCCTTCGATCAGAAAATGGCCATTGAGGTTGCAGTCAAGGCTGCTGCTGGTGCACCCGATATTCTTGGAGACTGTCCTTTCACCCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACAAATTGCATCTCATCAATTTATCCGACAAACCCACTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAAGTGCCTGTGGTGAAGTTTGATGACAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCTCTTGTGACTCCTCCTGAATTTTCTTCTGTGGGATCAAAGATAAATGGTGCTTTTGTAAAATTCTTGAAGAGCAAGGACCCAACTGATGGTTCAGAGCAGGCTTTGCATGAAGAGTTGAAGGCATTGGATGAGCATCTTAAGGCTCGTGGTCCTTATGTTGCTGGAGAGAAGCTCACTGCCGTTGATTTGAGTCTGGCACCGAAGTTGTACCATCTTGATATTGCTCTTGGCCATTTCAAGAAGTGGGCTTTCCCCGAAAACTTAACCAGTTTATCTAAATACAAAGAGTTGCTTTTCGCTCGAGAATCTTTTGTGAATACGAAGGCTTCCCCAGAACATGTAATTTCTGGTTGGGAGCCCAAGGTGAATGCTGCTGCAGAACATGTAATTTCTCATTCGGAGCCCAAGGCCATTGAGGTTGCTGTCAAGGCTGCTGCTGGTGCACCCGATGTCATTGGAGACTGCCCTTTCACCCAGAGAGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACAAATGGCATCTCATCAATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCAGTGGCGAAGATTGATGACAAATGGGTTCCTGACTCCGATGTCATTGTGGGGATTCTTGAGAAGAAGTATCCAGAGCCTTTTCTTGTGACTCCTCCTGAACTTTCTTCTGTGGGATCAAAGATAAATGGTGCTTTTGTAAAATTCTTGAAGAGCAAGGACCCGAATGATGGTTCAGAGCAGGCTTTGCTTGAAGAGTTGAAGGCGTTGGACGAGCATCTCAAGGCTCATGGTCCTTATGTTGCTGGAGAGAAGGTTACTGCGGTTGATTTGAGTCTGGCACCGAAGTTGTACCATCTTGATGTTGCACTTGGCCATTTCAAGAAGTGGACTTTCCCCGAAACCTTAACTAGTTTATCCGCATACAAAGAGTTGCTTTTCGCTCGAGAATCTTTTGTGAAGACAAAGGCTGCCCCCGAACATGTAATTTCTGGTTGGGAGCCCAAGGTGAATGCTGCATGA 1965 46.11 MVLEAAVKAAVGAPDVIGDCPFSHRVLLTLEEKKLAYKLHLINLSAKPSWFLEVSPGGKVPVVKFDDKWVPDSDVIVKTLEEKYPEPSLVTPPEFSSVGSKIFDTFVKFLKSKDPNDGSEQALLKELKAFDEHLKAHGPYVAGEKVTAVDLSLAPKLYHVDVALCHFKKWAIPKDLASLIAYKELLFARESFVKTKAAPEHIIAGWEPKFPTFPFDQKMAIEVAVKAAAGAPDILGDCPFTQRVLLTLEEKKVPYKLHLINLSDKPTWFLEVSPEGKVPVVKFDDKWVPDSDVIVGILEEKYPEPSLVTPPEFSSVGSKINGAFVKFLKSKDPTDGSEQALHEELKALDEHLKARGPYVAGEKLTAVDLSLAPKLYHLDIALGHFKKWAFPENLTSLSKYKELLFARESFVNTKASPEHVISGWEPKVNAAAEHVISHSEPKAIEVAVKAAAGAPDVIGDCPFTQRVLLTLEEKKVPYKWHLINLSDKPSWFLEVSPEGKVPVAKIDDKWVPDSDVIVGILEKKYPEPFLVTPPELSSVGSKINGAFVKFLKSKDPNDGSEQALLEELKALDEHLKAHGPYVAGEKVTAVDLSLAPKLYHLDVALGHFKKWTFPETLTSLSAYKELLFARESFVKTKAAPEHVISGWEPKVNAA 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2762953 2776830 - Tan0014543.1 Tan04g0340 748744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0340 654 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 66 215 IPR010987 -
Tan04g0340 654 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Tan04g0340 654 Pfam Glutathione S-transferase, N-terminal domain 238 300 IPR004045 -
Tan04g0340 654 Pfam Glutathione S-transferase, N-terminal domain 461 523 IPR004045 -
Tan04g0340 654 FunFam Glutathione S-transferase DHAR3 chloroplastic 219 307 - -
Tan04g0340 654 Gene3D - 90 211 - -
Tan04g0340 654 Gene3D - 531 653 - -
Tan04g0340 654 Gene3D - 308 430 - -
Tan04g0340 654 SUPERFAMILY GST C-terminal domain-like 543 651 IPR036282 -
Tan04g0340 654 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Tan04g0340 654 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 284 430 IPR010987 -
Tan04g0340 654 Gene3D Glutaredoxin 442 530 - -
Tan04g0340 654 Gene3D Glutaredoxin 1 89 - -
Tan04g0340 654 SUPERFAMILY GST C-terminal domain-like 84 211 IPR036282 -
Tan04g0340 654 CDD GST_N_family 238 295 - -
Tan04g0340 654 SFLD Main (cytGST) 237 392 - -
Tan04g0340 654 SFLD Main (cytGST) 460 617 - -
Tan04g0340 654 SFLD Main (cytGST) 19 166 - -
Tan04g0340 654 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 212 - -
Tan04g0340 654 SUPERFAMILY Thioredoxin-like 237 305 IPR036249 -
Tan04g0340 654 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Tan04g0340 654 SFLD Glutathione Transferase (cytosolic) 460 617 IPR040079 -
Tan04g0340 654 SFLD Glutathione Transferase (cytosolic) 19 166 IPR040079 -
Tan04g0340 654 SFLD Glutathione Transferase (cytosolic) 237 392 IPR040079 -
Tan04g0340 654 SUPERFAMILY GST C-terminal domain-like 316 428 IPR036282 -
Tan04g0340 654 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 444 650 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Tan04g0340 654 FunFam Glutathione S-transferase DHAR3, chloroplastic 308 430 - -
Tan04g0340 654 CDD GST_N_family 20 81 - -
Tan04g0340 654 FunFam Glutathione S-transferase DHAR3, chloroplastic 531 653 - -
Tan04g0340 654 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 451 529 IPR004045 -
Tan04g0340 654 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Tan04g0340 654 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 525 653 IPR010987 -
Tan04g0340 654 Gene3D Glutaredoxin 217 306 - -
Tan04g0340 654 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 228 306 IPR004045 -
Tan04g0340 654 SUPERFAMILY Thioredoxin-like 460 528 IPR036249 -
Tan04g0340 654 CDD GST_N_family 461 518 - -
Tan04g0340 654 Pfam Glutathione S-transferase, C-terminal domain 561 623 - -
Tan04g0340 654 Pfam Glutathione S-transferase, C-terminal domain 120 175 - -
Tan04g0340 654 Pfam Glutathione S-transferase, C-terminal domain 336 389 - -
Tan04g0340 654 FunFam Glutathione S-transferase DHAR3 chloroplastic 442 530 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0340 Tan-Chr4:2762953 Tan04g2034 Tan-Chr4:73261316 7.70E-75 dispersed
Tan04g0339 Tan-Chr4:2756110 Tan04g0340 Tan-Chr4:2762953 1.00E-100 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0340 K21888 - csv:101203666 373.244