Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g0347 | ATGATACTCTCAGAGCCCCCAAAGAGCAATAACAAATTAATGCACATCAAAGAATTCTTCGGCTTCTCCCATTCCTCTTCATCCAAAACCCTCCACTACTTTTCTTCCTTCCCCACCCCCGCCCGCCGGACGCCGCCGCTGCCGAGTTATGACCCTTCCGAATCGGCTGCCATGGAAGAGGCCATCACAAACTCCGAACCCATCATCACGAAATGGGACCCGGATTCTTCCGAATTCAACAGAATCACCTTCCTCTTCCGCCACGGCCGAGCTGAATCCGAGGAGTTTTTGAACTCAGTCAACGGCCTCCGGCGAGCAATGGACTTTTTCATATCGGAAAATTCCACCTCCACCGTCCTCGTTCTCGCTCAAAAACTGATGCAGGCCGCAATGAGACGACTCGAGAAGGAATTTTACCAGATTTTGAGTGAGAATCGCCAGAATCTCGACCCGGAATCCATCTCCAGCCGATCCTCCGACCGGTCGACGGCCGACGGGGAAATCGGTAGGGATTCCGTCCTTGACTTCGACAGAGTCTCATCGGATTTGAAATCGATTGCGGATTGCATGATCGATGCTGGGTATGGGAAAGAGTGCGTTAAAATCTATAAAGTAATCCGAAAATCGATCGTCGATGAAACTCTGTATCGCCTCGGAACAGAGAAGTTCAAATTGTCGAGAATTCAGAGATGGAATTGGGATTCGATCGAGCACGTGGTCAAGAATTGGATGAATTCGATCAAGATCGCCGTGAATACTCTGTTTCGAGGAGAGAAAATGCTCTGTGACGATGTTTTCTCGAGATCAGAAAGAATCAGAGAATCCTGTTTTTCCGAGATCACAAAAGATGGTGCAATCACTTTGTTCAAATTCCCGGAATTGGTCGCAAAAGGAAAGAAAGATTCCGAGAAAATATTTCTGTTAATGGAGCTCTACGAGGCGAATTCCGACGTTTTGCCGGAAATCGAGGTCATATTCGACTCTGTTTCGACGTCCCCCATTAAAACGCAAGCTCAAACGTCGATGGCTAAACTCGCGGATTGTATCCGCGATATTCTGTGTGAATTCGAGTCGACGATTCAGAAAGATTCGTCCAAAACTCCGGCACCCGGCGGTGGAATCCACCCACTGACACGATCGGCGATGAACTACATCTCGTCGTTAGGAGATTATAGTGGGACCTTCTCCGACATCCTCTCCGCCGAAAACTCTCAGATTCCGGCGTCGTACATGGAAACCCGCGCCGCCGAAGACGCTCTCTCTTCGCCGGTGGCAGCGCAGCTCGGGTGGCTAATTCTAGTCCTCCTCTGCAAACTAGACACAAAAGCAGAGCTCTACAAGGACGTATCACTCTCCTATCTCTTCCTCGCCAACAACCTGAACTTCATCGTGAAGACAGTAACGGCGACGAATCTGAGGACGGTCATCGGCAGCGAGTGGGTGGCGAATCACACGAGCAAGATGAAGCTGTACGCGGCGAACTACGAAGCGACAGCGTGGAGGAGAGTGATGACGGCGCTGCCGGAGAGGGGGTCGCCGGAAGTGGGGTCGCCGGAGACGGCAAAGGAAGGGTTTAGGAAGTTCAATGCGGCATTTGAAGAGGCTTACCGGAAACAGACGTCGTGGAGAGTGGAGGATGGGAAGCTGAGAGACGAATTGAAGATGTCGATAGCGAGGAAGATGCTGCCGGTGTACAGGGAGTTTTACGAGGGGTGTGTTGAGATGGTGGGTGTAGAGAGAGGGGCTTTGAAGGGCTTTGTGAGGTTTTCTCCTGATGATTTGGGAAATTATTTGTCTGATTTGTTTCATGGGGTTTCTTCTTCTGGGAGTAGTTCTTCTTTGTCTTCCTTTAGTGGGAGTAGCCCATTTTTTACCATTTGCCGGCGTCATTCATTCCCGCCGGAAGTCTGTTACTCACCCGCCACATCCACAGTAGCTTTCCTTCCTCTTCCAGCAGCTCACCACAGCCACCTCCGTCGGGCAGCGACGGCGCTGACGTACACGCCGCCCAATTTCAATTTCAAACCGGTCGCCCTCCGTCCGCCACATCACGAAAGTCAAAAGTCAGAAACACACCCGTCGCCATGGGAGAACCTCGATTTTCAGCCGTCATTTTCCATCGATCTTAGCATCTCATCATCACCGTCTTTGCCCCAACCACCAAAGGACCCACCATCTCTCTCAGACTCTTCTCCTTTCTGCAAAACCCTAAAATCCTACGTGCTGTCATCTCCCCACGACGCGTCAAATCCCCATAGCCTTGAAATTTCAGCGCCCTTTCAGATGGAAATGGAATAG | 2298 | 50.87 | MILSEPPKSNNKLMHIKEFFGFSHSSSSKTLHYFSSFPTPARRTPPLPSYDPSESAAMEEAITNSEPIITKWDPDSSEFNRITFLFRHGRAESEEFLNSVNGLRRAMDFFISENSTSTVLVLAQKLMQAAMRRLEKEFYQILSENRQNLDPESISSRSSDRSTADGEIGRDSVLDFDRVSSDLKSIADCMIDAGYGKECVKIYKVIRKSIVDETLYRLGTEKFKLSRIQRWNWDSIEHVVKNWMNSIKIAVNTLFRGEKMLCDDVFSRSERIRESCFSEITKDGAITLFKFPELVAKGKKDSEKIFLLMELYEANSDVLPEIEVIFDSVSTSPIKTQAQTSMAKLADCIRDILCEFESTIQKDSSKTPAPGGGIHPLTRSAMNYISSLGDYSGTFSDILSAENSQIPASYMETRAAEDALSSPVAAQLGWLILVLLCKLDTKAELYKDVSLSYLFLANNLNFIVKTVTATNLRTVIGSEWVANHTSKMKLYAANYEATAWRRVMTALPERGSPEVGSPETAKEGFRKFNAAFEEAYRKQTSWRVEDGKLRDELKMSIARKMLPVYREFYEGCVEMVGVERGALKGFVRFSPDDLGNYLSDLFHGVSSSGSSSSLSSFSGSSPFFTICRRHSFPPEVCYSPATSTVAFLPLPAAHHSHLRRAATALTYTPPNFNFKPVALRPPHHESQKSETHPSPWENLDFQPSFSIDLSISSSPSLPQPPKDPPSLSDSSPFCKTLKSYVLSSPHDASNPHSLEISAPFQMEME | 765 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2842484 | 2854401 | - | Tan0020104.1 | Tan04g0347 | 748751 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g0347 | 765 | SUPERFAMILY | Cullin repeat-like | 62 | 603 | IPR016159 | - | |
Tan04g0347 | 765 | Pfam | Exocyst complex component Exo70 N-terminal | 66 | 144 | - | - | |
Tan04g0347 | 765 | Gene3D | Exocyst complex component Exo70 | 69 | 611 | - | - | |
Tan04g0347 | 765 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 60 | 604 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro) | |
Tan04g0347 | 765 | MobiDBLite | consensus disorder prediction | 712 | 731 | - | - | |
Tan04g0347 | 765 | MobiDBLite | consensus disorder prediction | 743 | 765 | - | - | |
Tan04g0347 | 765 | Pfam | Exo70 exocyst complex subunit C-terminal | 241 | 600 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Tan04g0347 | 765 | MobiDBLite | consensus disorder prediction | 676 | 697 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0347 | Tan-Chr4:2842484 | Tan05g0340 | Tan-Chr5:2551565 | 8.80E-147 | dispersed | |
Tan03g1000 | Tan-Chr3:66417460 | Tan04g0347 | Tan-Chr4:2842484 | 1.90E-104 | wgd | |
Tan04g0347 | Tan-Chr4:2842484 | Tan08g1964 | Tan-Chr8:71770631 | 1.20E-146 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g0347 | K07195 | - | csv:101221801 | 1005.36 |