Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0353 ATGAGAGCTTCAAATGTCCATTTTCTCGTCTGGGTTCTCTGTGTTCTGTGTTTATCATCATCTCTCTCATCAGGATTCTCTCCTGATGATAATTTTCTTATCGATTGTGGATCATCCTCCAATAAAACAGTGGGAGGTCGTCTATTTCAACCTGATGATTTTTTCTCTGATGATTTATCAAATCCAAATGGGAAATATCTTTCCACTACAAGCAAAGTATCTAGTTCACCTCCATTGTTCTCATTCTCACATCTCTTTCAAACTGCAAAAGTATTTGAAACAACTTCCAAATACAACTTCAAAATAAAGAAACAGGGCAGGCACTGGATCCGCCTCTACTTTTACCCTTTTGTTTCTGGAAACTTCAACTTGAGTTTAGCTAGGTTCACAGTTTCTGCTCAAAATATCACCCTTCTCAAAGAGTTTCAGATCGACAGTGACGCGGTAATCAAGGAGTATTCTCTAAATGTCACTTCCAGCAATCTTGTTCTTACATTCACTCCCATGGTGAATTCATTTGCCTTCATCAATGCCTTGGAAGTTGTTTCTGTTCCTAATGAATTGATTCGTTTGGCTGTCGCCACTGTTGAGAAGCTAGAAGAAAGTTTGGGGAACAGGGCATTGGAGACAGTTGCTAGAGTGAATATGGGCAATGAAACGGTGTTTCCAAATAACGATGCTCTCTCTCGCCTTTGGGTTGCTGATGGTCCATACTTGATGCATAACGATCGGGTTGTCGTTGGGAAGTTTGTGTCAAATCTCAGTAGAGTGAACATGACACCAGACTCTGAAATTTTGGCTCCCCGTTCTGTGTATGGAACAGCAACTCAGTTAGGAGGTGATCCAGATACGGGTGTTAATGTTAATGTATCATGGTCATTTGACGTTGATCCGGGCTATGAATATCTGATTCGTTTTCATTTCTGTGATATTTTAGGCCTTCCTTTTGGATCGCTGTTCGATGTTTTTGTTAACTCATGGAAGGTTAAAGATCATCTTGACCTTAGTAAACTCACTTCAGGCATCCTATGTGCACCCTATGTCCTGGACACCATAGCCAGTCCAATTGACAACTCTAAGTTCAAAATAAGTGTTGGCCCTTCCAGTTTTAGTGATTACTCGACTGCCATTCTTAACGGACTCGAGATCATGAAAATAAGCGATTCTCGGGGGAGTCTTGATGGGCCCCCTTTTGATTTACACACAAAGAATGGTTCAAATGTGAAAGTTGGTCTTGTAGCAGGCTTGGTTGCTGGACTGGTTGTTGCTGCTGTTTTGGCCACTCTTGTTGTCGTGCTGTGCAGAAGAAGGAGATCGGGGCTTGTCAGTCATTTGAAGGAAGAGGAAAATTTTGGTGTGAATGGAAGAGAAAGCAACTATATCATTGGATCTGTTGCCTTTTCAAGCTCAAAGATCGGTTATCGATATCCTCTAGCAGCTATTCTGGAAGCTACAGATCATTTTAGTGAAAGTTTAGCCATTGGCCTTGGTGGGTTTGGGAAAGTTTACAAGGGAATGTTGCGGGACGACACAGAAGTGGCAGTGAAAAGAGGGGCTTCAAAATCTCAGCAGGGTCTTGCAGAGTTTCGAACTGAAATTGAGATGTTGTCCCAATTTCGCCACCGTCATTTGGTATCTCTGATCGGTTACTGCGACGAGCAAAATGAGATGATTATAATCTACGAATACATGGAAAAAGGGACTCTCAAGGACCATTTGTACGGATCAGAACTTCCAAGTTTAAGCTGGAAACAAAGGCTTGAGATTTGCATTGGCTCGGCTAGAGGACTTCACTATCTTCACACTGGCTCCACTAAGGCAATCATACACAGAGATGTCAAAACTGCAAACATTCTTCTAGATCAAAACTACATGGCCAAAGTTGCAGACTTTGGACTCTCAAAGACGGGCCCCGAATTCGAGAAGACTCATGTCAGTACAGCAGTAAAGGGAAGCTTTGGCTATCTCGACCCTGAGTATTTAACAACGCAGCAACTGACTGAGAAATCCGATGTCTACTCTTTCGGCGTCGTTATGTTCGAAGTCCTTTGCGGTAGGCCTGTCATTGATCCATCTCTCCCAAGGGAAAAGGTGAATTTAATTGAATGGGTAATGAGGAGAAAGGATAGAGATCAACTAGAGGCAATCGTAGACGCTCATATTGTTGAGCAAATCAAACTAGATTCTCTGAGAAAATACGTAGAGACAGCCGAGAAATGCTTGGCAGAATGCAGCGTGGATCGCCCGACAATGGGAAACATTCTGTGGAATCTGGAGTGTGCACTTCAACTCCAAGGGGATGAAAAATCTCATCATGGCAAGAAATCATCCTCACAAGCTGATCTTTCCAACCACTGGGAGGCGAGTGTATCGACTACTCAGTTCACCACGGGGAGCGCGGTCGATATCGCTGGTGTTTCGATGAGTAAGGTATTTGCTCAAATGGTGAGGGAAGATATGAGATAG 2466 42.98 MRASNVHFLVWVLCVLCLSSSLSSGFSPDDNFLIDCGSSSNKTVGGRLFQPDDFFSDDLSNPNGKYLSTTSKVSSSPPLFSFSHLFQTAKVFETTSKYNFKIKKQGRHWIRLYFYPFVSGNFNLSLARFTVSAQNITLLKEFQIDSDAVIKEYSLNVTSSNLVLTFTPMVNSFAFINALEVVSVPNELIRLAVATVEKLEESLGNRALETVARVNMGNETVFPNNDALSRLWVADGPYLMHNDRVVVGKFVSNLSRVNMTPDSEILAPRSVYGTATQLGGDPDTGVNVNVSWSFDVDPGYEYLIRFHFCDILGLPFGSLFDVFVNSWKVKDHLDLSKLTSGILCAPYVLDTIASPIDNSKFKISVGPSSFSDYSTAILNGLEIMKISDSRGSLDGPPFDLHTKNGSNVKVGLVAGLVAGLVVAAVLATLVVVLCRRRRSGLVSHLKEEENFGVNGRESNYIIGSVAFSSSKIGYRYPLAAILEATDHFSESLAIGLGGFGKVYKGMLRDDTEVAVKRGASKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEQNEMIIIYEYMEKGTLKDHLYGSELPSLSWKQRLEICIGSARGLHYLHTGSTKAIIHRDVKTANILLDQNYMAKVADFGLSKTGPEFEKTHVSTAVKGSFGYLDPEYLTTQQLTEKSDVYSFGVVMFEVLCGRPVIDPSLPREKVNLIEWVMRRKDRDQLEAIVDAHIVEQIKLDSLRKYVETAEKCLAECSVDRPTMGNILWNLECALQLQGDEKSHHGKKSSSQADLSNHWEASVSTTQFTTGSAVDIAGVSMSKVFAQMVREDMR 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2992192 2996011 + Tan0022599.1 Tan04g0353 748757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0353 821 SMART serkin_6 488 761 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0353 821 CDD STKc_IRAK 494 759 - -
Tan04g0353 821 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524(InterPro)
Tan04g0353 821 PANTHER OS07G0166700 PROTEIN 476 765 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Tan04g0353 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g0353 821 FunFam receptor-like protein kinase FERONIA 454 563 - -
Tan04g0353 821 Gene3D Transferase(Phosphotransferase) domain 1 564 786 - -
Tan04g0353 821 Gene3D - 206 387 - -
Tan04g0353 821 Gene3D - 31 185 - -
Tan04g0353 821 SUPERFAMILY Protein kinase-like (PK-like) 471 758 IPR011009 -
Tan04g0353 821 Gene3D Phosphorylase Kinase; domain 1 456 563 - -
Tan04g0353 821 ProSiteProfiles Protein kinase domain profile. 488 762 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0353 821 FunFam Receptor-like protein kinase FERONIA 564 780 - -
Tan04g0353 821 Pfam Protein tyrosine and serine/threonine kinase 493 755 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g0353 821 Pfam Malectin-like domain 34 386 IPR024788 -
Tan04g0353 821 FunFam Putative receptor-like protein kinase 31 185 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0353 Tan-Chr4:2992192 Tan05g0329 Tan-Chr5:2469201 3.80E-228 dispersed
Tan04g0353 Tan-Chr4:2992192 Tan06g0330 Tan-Chr6:2602063 2.10E-170 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67422 PF12819 Malectin_like 3.40E-29 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0353 - - - 0.0