Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0370 ATGGCGGCTTCGAGAATTAGCAGCACCATCGGCTTCTCACAGCTCTCGTCTTGCTCCGAAATTTCAGTTTCTTGCATTCCCTTTTCAACCAATAGATTAAGATTCTCGACCACCAATCTTTCTCCTCTTAAGCTTCAAAAACAAGCATTTGGAAGACGAGCCAGACCAGTAATTGCTCTGAAAATGGCTGCTGAAGCTGTTCAGGAAGTTCTTCCTCCAGCCCTCACTTCGGCTTCAGAACCACCTCCTGTCTTTGATGGAGCGACGAGGCTTTATATATCTTATACCTGCCCTTATGCGCAACGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCAATAAATCTACAAGATAGGCCATCTTGGTACAAGGAAAAAGTTTACCCACCTAACAAGGTACCAGCTCTTGAACATAATAATGAAGTCCAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGACGGGCCTTCATTATTTCCTGATGATCCGGGAAAGAGAGTGTTTTCTGAAGAGTTGATAAACTACATTGACTCTTTCAGGGGATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGATGTGGCGTTTGACTACATCGAATCAGCTCTTTGGAAATATGATGATGGCCCGTTTTTTCTAGGCCAGTTTAGTCTGGTGGATATAGCTTATGCTCCCTTTATCGAAAGGTTTCAGCCATTCTTGCTGGAAGTAAAGACGTATGACATCACTTCTGGCAGGCCAAGACTGGCAGCTTGGATTGAGGAGATGAACAAGATTGAGGGGTACCGACAAACAAAGGGCGAACCACGGGAGCATGTGGATAGCTATAAGAAGCGGTTCTTGGGCCATTTGTGA 894 43.51 MAASRISSTIGFSQLSSCSEISVSCIPFSTNRLRFSTTNLSPLKLQKQAFGRRARPVIALKMAAEAVQEVLPPALTSASEPPPVFDGATRLYISYTCPYAQRVWITRNCKGLQNKIQLVPINLQDRPSWYKEKVYPPNKVPALEHNNEVQGESLDLIKYIDSNFDGPSLFPDDPGKRVFSEELINYIDSFRGSVVSSFKGDGNEADVAFDYIESALWKYDDGPFFLGQFSLVDIAYAPFIERFQPFLLEVKTYDITSGRPRLAAWIEEMNKIEGYRQTKGEPREHVDSYKKRFLGHL 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3070642 3075739 + Tan0018594.1 Tan04g0370 748774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0370 297 PANTHER GLUTATHIONE S-TRANSFERASE L1 62 295 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
Tan04g0370 297 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 87 168 IPR004045 -
Tan04g0370 297 Gene3D - 166 297 - -
Tan04g0370 297 FunFam Glutathione S-transferase L2, chloroplastic 62 165 - -
Tan04g0370 297 Pfam Glutathione S-transferase, C-terminal domain 208 267 - -
Tan04g0370 297 CDD GST_C_Lambda 173 290 - -
Tan04g0370 297 FunFam Lambda class glutathione S-transferase 166 296 - -
Tan04g0370 297 SUPERFAMILY GST C-terminal domain-like 164 293 IPR036282 -
Tan04g0370 297 SUPERFAMILY Thioredoxin-like 79 169 IPR036249 -
Tan04g0370 297 Pfam Glutathione S-transferase, N-terminal domain 91 167 IPR004045 -
Tan04g0370 297 Gene3D Glutaredoxin 62 165 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0370 Tan-Chr4:3070642 Tan08g1948 Tan-Chr8:71639491 8.60E-90 dispersed
Tan04g0370 Tan-Chr4:3070642 Tan04g0371 Tan-Chr4:3070642 4.20E-169 tandem
Tan04g0370 Tan-Chr4:3070642 Tan08g1945 Tan-Chr8:71619049 3.50E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0370 K00799 - csv:101220995 494.967