Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0375 ATGAACCGAGCGAGCAATTTAGTAAAGTTAAAGGAGGTCTCTGCAAAAAAGAGACTGGTAAGAAAAGATACAAGATATATACTGGGCAGAGTGTATTTGTGTGTGAATTTTAACCTCCTCTCTGTCTTAGTTGAGTTCTCTCTCTGTGGACTACGAGAGAGAGAGAGGGAGAGAGGGAGAGAATACGCAATGGGATGGTTTCTCTGTTCTGGAAGTTCAAATAAGAAGGAAAAGCAGCAGCAGCAGAAGCAGCAGGTTCAGAAGAAGGACGACGATCCGATCCCATCGACTTCAGAAAAATTGATGGTAAAGCCGTCATTTAGTGGGAAGAATGAGGCTCTAAAAGATGGAAGTTCTGATCAGATTTCAGCACAAACAATTACATTCTCATTCCGAGAGTTGGCAGCTGCAACAAAGTATTTTAGAGCAGACTGTCTTTTAGGTGAAGGAGGTTTTGGTCAAGTATATAAAGGACGATTGGAGAGCATAAATCAGGTAGTTGCCATCAAGCAACTTGATCGAAATGGGCTACAAGGAAACAGGGAATTCCTTGTTGAAGTACTAATGTTAAGCCTACTCCATCATCCGAATCTTGTTAATTTAATTGGCTATTGTGCCGATGGTGATCAAAGACTTTTGGTTTATGAATACATGCCATTGGGATCTTTGGAAGACCATCTACATGATCTCCCACCCGATAAGAAACGACTAGACTGGAATACAAGAATGAAAATAGCTGCGGGTGCTGCTAAGGGCTTAGAGTATTTGCATGACAAAGCTAACCCCCCAGTTATATATCGTGATCTGAAATGCTCTAACATCCTGCTTAGTGAAGATTACCATCCTAAGCTATCTGATTTTGGCTTGGCAAAATTGGGCCCCGTGGGGGATAACACTCATGTGTCCACCAGAGTGATGGGAACTTACGGATACTGTGCTCCTGAATATGCAATGACTGGCCAGCTCACTTTAAAATCAGATGTTTATAGCTTTGGAGTTGTTCTGCTTGAAATTATTACTGGCAGAAAAGCTATTGACAATTCAAGAGCTGCAGGGGAACATAATTTGGTGGCATGGGCACATCCCTTATTTAAAGACAGAAGGAAATTTTCGCAGATGGCTGATCCATTGCTCCAAGGACAATACCCAGTCAGAGGCTTATACCAAGCTCTTGCAGTAGCTGCAATGTGTGTTCAGGAACAGCCTCATATGCGACCCCTTATTGCTGATGTTGTCACTGCCCTTACATATCTTGCCTCCCAAAAATACGATCCCGAAACCCAGCCAGTTCAAAGCGCTCGCAGTAGCTCGTCCACGCCTAGATCTTCTAGAAGAGAACTGTGA 1344 43.08 MNRASNLVKLKEVSAKKRLVRKDTRYILGRVYLCVNFNLLSVLVEFSLCGLRERERERGREYAMGWFLCSGSSNKKEKQQQQKQQVQKKDDDPIPSTSEKLMVKPSFSGKNEALKDGSSDQISAQTITFSFRELAAATKYFRADCLLGEGGFGQVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLSEDYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRAAGEHNLVAWAHPLFKDRRKFSQMADPLLQGQYPVRGLYQALAVAAMCVQEQPHMRPLIADVVTALTYLASQKYDPETQPVQSARSSSSTPRSSRREL 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3103382 3108033 + Tan0007059.1 Tan04g0375 748779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0375 447 MobiDBLite consensus disorder prediction 78 101 - -
Tan04g0375 447 Gene3D Phosphorylase Kinase; domain 1 104 217 - -
Tan04g0375 447 MobiDBLite consensus disorder prediction 425 447 - -
Tan04g0375 447 MobiDBLite consensus disorder prediction 425 440 - -
Tan04g0375 447 FunFam Serine/threonine-protein kinase PBS1 112 217 - -
Tan04g0375 447 Gene3D Transferase(Phosphotransferase) domain 1 218 438 - -
Tan04g0375 447 Pfam Protein tyrosine and serine/threonine kinase 145 412 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g0375 447 PANTHER OS07G0668900 PROTEIN 78 439 - -
Tan04g0375 447 SMART serkin_6 141 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0375 447 CDD STKc_IRAK 147 416 - -
Tan04g0375 447 ProSiteProfiles Protein kinase domain profile. 141 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0375 447 FunFam Serine/threonine-protein kinase PBS1 218 433 - -
Tan04g0375 447 SUPERFAMILY Protein kinase-like (PK-like) 129 436 IPR011009 -
Tan04g0375 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g0375 447 MobiDBLite consensus disorder prediction 81 97 - -
Tan04g0375 447 ProSitePatterns Protein kinases ATP-binding region signature. 147 170 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2550 Tan-Chr1:36917313 Tan04g0375 Tan-Chr4:3103382 1.50E-148 dispersed
Tan04g0375 Tan-Chr4:3103382 Tan10g0966 Tan-Chr10:8421793 1.30E-161 dispersed
Tan01g1692 Tan-Chr1:17992777 Tan04g0375 Tan-Chr4:3103382 9.40E-132 transposed
Tan06g1468 Tan-Chr6:19782002 Tan04g0375 Tan-Chr4:3103382 6.80E-150 transposed
Tan04g0375 Tan-Chr4:3103382 Tan08g1943 Tan-Chr8:71591498 3.00E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67423 PF07714 PK_Tyr_Ser-Thr 1.20E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0375 - - - 0.0