Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0490 ATGGGAAAACTAAGCTTGAGCTGCTGCAATAGCTTTCTTGAGAATTCAAAACCTTATTTTGCCATGATTTCCTTACAATTTGGATATGCTGGCATGAACATCATCACCAAAGTCTCTCTTAGTAGAGGGATGAGCCATTACGTCCTCGTTGTTTATCGACATGCTTTCGCTACTGCTTCCATTGCCCCCTTCGTTCTCTTCTTCGAACGGAGAGGACAGCCAAGGATAACACTCAAAGTTTTCACTCAAATATTTGTGTTGGCTTTGCTTGGACCCGTTATCGATCAAAATTTTTACTATGCTGGATTGAAATATACTTCACCAACTTTCTCTTGTGCCATGAGCAACATGCTGCCTGCAATGACATTTGTGATGGCTGTGATCTTCAGGATGGAAAAATTGGACATGAAGAAATTGAGATGCCAAGCAAAAATTTTGGGAACTTTAGTGACAGTGGCAGGAGCAATGCTAATGACTTTGTACAAAGGCCCACCTGTTGAAATGGTTTGGTCTAAACATTCTCATGTTCCTACAAAATCTAATGAAGCCTCTGATAGTTCCAACAAAGATTGGTTCAAAGGCTCCATTTTCCTCATCATTGCCACTCTTGCTTGGTCTTCTCTTTTTGTCTTGCAGAATCAGGCATTGAAGACATACAAGAACCACCAATTCACTCTCACTACACTGGTGTGTTTTCTTGGGACTTTGCAGGCCATAGCTGTGACTGTAGTAGCTGAGCACAAACCTTCTGTTTGGAGAATTGGTTGGGATATGAATCTCCTTGCTGCTGCCTATGCTGGAATTGTGACATCAAGTATTTCATATTATGTACAAGGACTGGTGATGAAGAAGAGGGGACCTGTATTTGCAACTGCTTTTAGCCCTTTGATGATGATCATTGTGGCCATCATGGGCTCTTTCATTCTTGCTGAAAAGATCTTTCTTGGAGGAATAATAGGATCCATTTTGATAGTATTTGGGCTATATTCAGTCCTTTGGGGAAAGCACAAGGAGAATTTGGAGAGCAAAAGTGCTGCTGATGCTGATAAAATACCAGAAGTAATTAAAGCTTCTTCTCAACCAAATAATAATAATAATAATAATAATGCAAATCTTGAAGCTAATAAGCTTTCCAATAATTCACTTTTTATTTCCATGCCTGACCCTGAAAATCTCATCAAACCCAGCCAAATCCCAAGAGAATAA 1206 39.8 MGKLSLSCCNSFLENSKPYFAMISLQFGYAGMNIITKVSLSRGMSHYVLVVYRHAFATASIAPFVLFFERRGQPRITLKVFTQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLDMKKLRCQAKILGTLVTVAGAMLMTLYKGPPVEMVWSKHSHVPTKSNEASDSSNKDWFKGSIFLIIATLAWSSLFVLQNQALKTYKNHQFTLTTLVCFLGTLQAIAVTVVAEHKPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFATAFSPLMMIIVAIMGSFILAEKIFLGGIIGSILIVFGLYSVLWGKHKENLESKSAADADKIPEVIKASSQPNNNNNNNNANLEANKLSNNSLFISMPDPENLIKPSQIPRE 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4034185 4038851 - Tan0005710.1 Tan04g0490 748894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0490 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Tan04g0490 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 337 - -
Tan04g0490 401 PANTHER WAT1-RELATED PROTEIN 20 348 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan04g0490 401 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020(InterPro)
Tan04g0490 401 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020(InterPro)
Tan04g0490 401 MobiDBLite consensus disorder prediction 381 401 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0522 Tan-Chr3:59590944 Tan04g0490 Tan-Chr4:4034185 3.30E-122 dispersed
Tan04g0490 Tan-Chr4:4034185 Tan08g1288 Tan-Chr8:43761805 4.80E-96 dispersed
Tan04g0490 Tan-Chr4:4034185 Tan08g1287 Tan-Chr8:43761805 1.70E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0490 - - - 0.0