Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0568 ATGGCAGGGATGTTTAATGGGGAGGGATCATCGTCCGTAACTTCATCGCCTTTGCAGCTCTTTCCGTGGTCGTTATCGCCCGGTATAGGATCGCCATACCCTTTTCTAAGGGAGCTCAAGTCTGAAGAGAGGGGCTTGTGTCTGATTCACCTTCTTCTTGCTTGTGCCAACCAAGTTGCCATTGGCAACATTGAAAATGCTAATGTTGGCCTTGAGCAAATTTCCCATCTCGCCTCGCCCGACGGGGACACAATGCAGCGAATTGCTGCCTACTTCACCGAGGCACTCGCTGATCGGATACTTAAATCCTGGCCAGGCTTACACAAAGCCTTGAACTCTACCAAAATATTGTCAGTCCCTGAAGAGATTCTTGCTCAGAGATTGTTCTTTGAACTATGTCCTTTCTTGAAGCTTGCATATGTGATAACTAATCAGGCTATCATAGAAGCTATGGAGGGAGAAAGGATGATTCATATTATTGATTTCAAATCATGTGAGCCTGCCCAATGGATAAACCTTCTTCAGACATTGAAAGATAGGCCAGACGGTCCGCCTCACTTGAGAATAACTGGAATTCACGAACAGAAGGAGGTGTTGGAACAAATGGCTCTTCGGCTTACCGAAGAGGCCGAAAAATGGGACATACCATTTCAGTTCACCCCTGTTGTTAGCAAGTTAGAGAACCTTGACCTTGAAAGTTTAAGGGTCAAGACAGGAGAAGCACTTGCAGTTAGCTCTGTACTTGAACTTCACTCAATTTTAGCCACCGATGACGATAAGAAAACATCGCCATCTGCATCGAAGAACTTGCAAAAACTCCTACGTATGAAGCAGCGAACACTCGGAGAGTGGCTCGAGACAGATTCGTTGCAAGTTTTTAGTAGCCCTGATTCAGCCTCAGTATCTTCCCCATCAGGATTGAATCCTTCCCAAAAGATGAATAGTTTTCTGAGTGCACTCTGGGGCCTTTCTCCAAAAGTGATGGTAATAACAGAGCAAGAATCAAACCTGAATGGATCAGCTTTCATGGAGAGAGTACTAGAAGCACTAAACTTCTACGCTGCATTGTTTGATTGCTTGGAATCGACCGTGTCGAGATCATCCATCGAGCGACAAAGGGTCGAGAAGATGCTTTTAGGAGAGGAAATCAAAAACATCATTGCTTGCGAGGGGGCGGAGAGAACGGAGAGGCACGAAAAGCTCGAGAAATGGATACTAAGGCTCGAATCCGTGGGGTTCGGGAGGGTTCCATTGAGTTATCATAGTATGTTATTGGGAAGTAGATTGTTGCAGAGCTATGGATATGATGGGTATAAAATCAAAGAAGAGAATGGATTTTTGTTCATCTGTTGGCAAGATAGGCCTCTTTTTTCAGTCTCAGCTTGGGGGATTCAAAGGCAAAGCTGA 1407 45.2 MAGMFNGEGSSSVTSSPLQLFPWSLSPGIGSPYPFLRELKSEERGLCLIHLLLACANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTKILSVPEEILAQRLFFELCPFLKLAYVITNQAIIEAMEGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHLRITGIHEQKEVLEQMALRLTEEAEKWDIPFQFTPVVSKLENLDLESLRVKTGEALAVSSVLELHSILATDDDKKTSPSASKNLQKLLRMKQRTLGEWLETDSLQVFSSPDSASVSSPSGLNPSQKMNSFLSALWGLSPKVMVITEQESNLNGSAFMERVLEALNFYAALFDCLESTVSRSSIERQRVEKMLLGEEIKNIIACEGAERTERHEKLEKWILRLESVGFGRVPLSYHSMLLGSRLLQSYGYDGYKIKEENGFLFICWQDRPLFSVSAWGIQRQS 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4791626 4794583 - Tan0001744.1 Tan04g0568 748972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0568 468 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 462 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Tan04g0568 468 Pfam GRAS domain family 48 462 IPR005202 -
Tan04g0568 468 ProSiteProfiles GRAS family profile. 39 463 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0568 Tan-Chr4:4791626 Tan09g0798 Tan-Chr9:58659799 5.00E-169 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27180 PF03514 GRAS 6.20E-136 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0568 - - - 0.0