Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0574 ATGTCGAAGGAAACAGCAGCTATTATGATTCAATCTGCATTTCGTGGATATACGGCAAGGAAAGCATTGAGGGGTCTCAAAGCATTGATGAGGTTGAGGTCATTGGTACAAGGGCACTCTGTGAAACGGCAGGTGGCCTCTACTTTAAAAAGCATGCAAACTCTTGCACATGTACAGTCTGAGATTCGTGCAAGGAGAATAAGAATTTCGGAGGAAAATCAGGCTTTCCAGCGGCAACTTCGTAACAAACGTGAGAAAGATCTCGAGAAGTTAAAAACTTCTGAGGATGACTGGAATCGTAGCACCCAATCTAAAGCGCAAATTGAAGCTAAATTATTGAACAAGCAAGAGGCTGCAATAAGAAGAGAAAGGGCTCTGGCTTATGCTTACTCACATCAGCAAACATGGAAGAATTCTTCAAAAACTGCAACCCCTACTGTCATGGATCCAAACAATCCTCAATGGGGTTGGAGTTGGCTGGAGAGGTGGATGGCAGCTCGTCCATGGGAACCTCGAAACACTGAGGATCACCCGGATCACATTTCTGTGACGAGTGTTGCAACTCGTGCATCTGTGGTAGACATAATCCAAATTTATGCCCGTCGTGATCAGAACTCCCCTACCAAGCCTTCTTCAAAGACTCCTACTACCCAAAAGTCAAGCCAGCTGCATAGGCAACAGTCTCCTTCAATTCCCAAGGCATTATCTTCATCATCTAGCAGAAAGAAAACAAATCTAGCCAACTCAAGGATAGGCAGCTGGGGCGGGGATGATGACACGAGAAGCACTGCAAGTGTCAAGTCAAAGCTCTCCCGGAGGCATTCTATTGCAGGGTCATCATTTATGGACGACCTAAGCCTCGCCAGTTTACCTTCAGTTTCAAGTTACACAACGCCATCGAAGGCCGTGAAGGCTCGGTCCCGGTTGGCAAGTTCATCTGTGACAGAGAAGAAAGGGACGATGGAAAAAGGATCTGGAAGCACGGGTTTTGCAAAGAAGCGGCTCACCTTTACAGCTTCCCCTACTAAACCAAGGAGGCTATCAAGTCCTCCAATTGTGAATACTAGCTAA 1071 46.41 MSKETAAIMIQSAFRGYTARKALRGLKALMRLRSLVQGHSVKRQVASTLKSMQTLAHVQSEIRARRIRISEENQAFQRQLRNKREKDLEKLKTSEDDWNRSTQSKAQIEAKLLNKQEAAIRRERALAYAYSHQQTWKNSSKTATPTVMDPNNPQWGWSWLERWMAARPWEPRNTEDHPDHISVTSVATRASVVDIIQIYARRDQNSPTKPSSKTPTTQKSSQLHRQQSPSIPKALSSSSSRKKTNLANSRIGSWGGDDDTRSTASVKSKLSRRHSIAGSSFMDDLSLASLPSVSSYTTPSKAVKARSRLASSSVTEKKGTMEKGSGSTGFAKKRLTFTASPTKPRRLSSPPIVNTS 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4837800 4841762 - Tan0015608.2 Tan04g0574 748978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0574 356 Coils Coil 66 86 - -
Tan04g0574 356 MobiDBLite consensus disorder prediction 331 356 - -
Tan04g0574 356 MobiDBLite consensus disorder prediction 200 274 - -
Tan04g0574 356 ProSiteProfiles IQ motif profile. 3 31 - -
Tan04g0574 356 PANTHER IQ-DOMAIN 5-RELATED 3 321 - -
Tan04g0574 356 Pfam IQ calmodulin-binding motif 6 24 IPR000048 GO:0005515(InterPro)
Tan04g0574 356 MobiDBLite consensus disorder prediction 293 356 - -
Tan04g0574 356 MobiDBLite consensus disorder prediction 201 261 - -
Tan04g0574 356 MobiDBLite consensus disorder prediction 293 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0574 Tan-Chr4:4837800 Tan11g0812 Tan-Chr11:6799965 4.40E-101 dispersed
Tan04g0573 Tan-Chr4:4837800 Tan04g0574 Tan-Chr4:4837800 3.10E-189 tandem
Tan04g0574 Tan-Chr4:4837800 Tan04g0575 Tan-Chr4:4837800 1.10E-189 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0574 - - - 0.0