Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0596 ATGGCGAAAGATGACGTCACGGCGCGAGGGTTCTCCGGCAAGGACTACTACGACCCTCCTCCGGCTCCGCTGTTCGACGCGGCGGAGCTCGGTAAGTGGTCCTTTTACAGAGCCCTCATTGCCGAGTTCATCGCCACTCTCCTTTTTCTCTATATCACCATCTTGACTGTGATTGGCTACAGTAGCCAGACCGACCCCCACAAGCCCGGCGGCGACGCTTGCGGCGGCGTTGGCATCCTCGGCATCGCTTGGGGCTTCGGTGGCATGATCTTCGTCCTCGTCTATTGCACCGCCGGCATTTCAGGTGGGCATATCAACCCGGCGGTGACATTCGGGCTACTGTTAGCCCGTAAGGTGTCGCTGGTTCGGGCAGTGGCGTACATGGTGGCTCAGTGCTTGGGGGCCGTATGCGGAACGGGGCTGGTTAAATCCTTACAAAAGGATTACTTCAACAAGTATGGCGGCGGCGCGAACCAGCTCGCCGACGGCTACAGCAAAGGCACCGGCTTGGGGGCCGAAATCGTCGGTACCTTCATCTTGGTCTACACCGTCTTCTCCGCCACCGACTCCAAGAGAAAAGCCAGAGACTCCCATGTTCCTGTACTGGCTCCACTCCCAATAGGATTTGCTGTGTTCATGGTTCACTTAGCCACCATCCCCGTTACCGGCACCAGCATCAACCCTGCTAGAAGCTTCGGCCCTGCTGTTATCTTGAATAGGGAAAAAGCTTGGGATGATCATTGGATGTTCTGGGTTGGGCCTTTCATCGGAGCCGCCATCGCAGCCTTCTACCATCAGTTCATTTTGAGGGCTGGCGTGACCAAGGCTCTTAGCTCTTTCCGGAGCAACCCCTCTGTTTGA 861 57.03 MAKDDVTARGFSGKDYYDPPPAPLFDAAELGKWSFYRALIAEFIATLLFLYITILTVIGYSSQTDPHKPGGDACGGVGILGIAWGFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLVRAVAYMVAQCLGAVCGTGLVKSLQKDYFNKYGGGANQLADGYSKGTGLGAEIVGTFILVYTVFSATDSKRKARDSHVPVLAPLPIGFAVFMVHLATIPVTGTSINPARSFGPAVILNREKAWDDHWMFWVGPFIGAAIAAFYHQFILRAGVTKALSSFRSNPSV 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5061882 5066595 - Tan0007114.1 Tan04g0596 749000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0596 286 SUPERFAMILY Aquaporin-like 30 273 IPR023271 -
Tan04g0596 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 282 IPR034294 GO:0005886(PANTHER)|GO:0015250(PANTHER)
Tan04g0596 286 FunFam Probable aquaporin PIP1-2 22 284 - -
Tan04g0596 286 Gene3D Glycerol uptake facilitator protein. 22 286 IPR023271 -
Tan04g0596 286 CDD MIP 37 268 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan04g0596 286 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan04g0596 286 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan04g0596 286 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan04g0596 286 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan04g0596 286 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan04g0596 286 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan04g0596 286 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Tan04g0596 286 Pfam Major intrinsic protein 30 265 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan04g0596 286 NCBIfam MIP family channel protein 41 265 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0596 Tan-Chr4:5061882 Tan05g0256 Tan-Chr5:1952043 5.90E-120 dispersed
Tan04g0596 Tan-Chr4:5061882 Tan04g0597 Tan-Chr4:5061882 5.40E-142 tandem
Tan11g0853 Tan-Chr11:7002074 Tan04g0596 Tan-Chr4:5061882 4.10E-129 wgd
Tan04g0596 Tan-Chr4:5061882 Tan08g1884 Tan-Chr8:71178168 4.20E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0596 K09872 - csv:101204956 533.872