Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0638 ATGGTCGCCGCCGGTCAGGGAGGAGGCTGCTCCAACATCGGAACCATCGCCGTCCACGTGATCACGGGGCGGTGGTTCGTGGTGTTCGCTTCACTTCTAATCATGGCGGCTGCCGGCGCCACGTACATGTTCAGCCTCTATTCCAACGACATAAAGTCGGTTTTGGGTTACGATCAAACGACGCTGAATTTGTTGAGTTTTTTTAAGGATTTGGGTGCAAACGTCGGCGTTTTGTCTGGTCTTATCAATGAAGTTACGCCGCCGTGGGTGGTTCTGTCCATCGGCGCCGTCCTTAATTTCTTTGGTTACTTTATGATTTGGCTCGCCGTTACTAAGCGGATCTCGACGCCTAAAGTTTGGCAAATGTGTCTCTATATTTGTGTTGGAGCTAATTCTCAATCCTTTGCTAATACTGGCTCGCTTGTTACTTGTGTCAAGAACTTCCCCGAGAGCCGGGGCGTCGTTCTCGGTATCTTAAAGGGCTACGTCGGCCTGAGCGGCGCCATAATCACACAACTCTTCCACGCATTCTACGGCTCCGACACCAAATCCTTAATCCTCCTCATCGGATGGCTCCCGGCGGCGATATCCTTCGCATTTTTACGAACAATTCGGATCATGAAAGTAATCCGACAGCCAAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCTCTCGGCCTCGCCGGATTCCTCATGCTAATGATCATCATAGAAAGCAAAGTAATGTTCACTCAAAGCGAATTCGGCGGTAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCCCTCGCCGTCGTCGTTGTCGAAGAATACAACCTCTGGAAACTCAAGACCGCCTCCATTACAGCCCCGAATCCAATTCAAATCGTAACAGAGAAACCAAATCTCCCAAAAACAGAGCCTCCAAAACAAACCCCACAACGACAAAAACAGCCCTCTTGCTGGACAACAATCTTCAGCCCGCCGGAACGCGGCGAGGATTTCACGATTCTCCAAGCTCTGTTCAGCATGGACATGCTGATTCTGTTCTTCTCTGCAACTTGCGGCGTCGGCGGCACGTTGACGGCGATCGACAATCTGGGTCAGATCGGAATGTCCTTGGGATACCCAAAAAGAAGCATCAGCACATTTGTAACTCTCGTTAGCATTTGGAATTACCTCGGCCGAGTCGCCTCTGGTTTCGTCTCTGAAATTGTTCTAACAAAATACAAATTCCCTCGTCCTTTAATGCTTTCTTTAACCCTTCTTTTGTCCTGCGTCGGCCATTTGATGATCGCCTTCGATGTTCCAAATGGGCTTTACGTGGCTTCGATTGTGATCGGATTCTGCTTCGGCGCGCAATGGCCGTTGATTTTCGCTATAATTTCCGAGCTATTTGGGTTGAAATATTACTCCACGCTTTACAATTTCGGGTCAGTGGCGAGCCCGATTGGGCTTTATGTGCTGAATGTGAAAGTAGCGGGGAATTTCTACGACAGAGAGGCGGAGAAGCAGCTGACAGCAAAAGGGCTTGTGAGAAAAGCAGGGGAGGAGCTAAAGTGCTTTGGAGGGGAGTGTTTTAAGCTTTCGTTTATTGTAATTACGGGAGTTACTTTGTTGGGTATGCTTGTTTCGTTGATTTTAGTGATTAGAACGAGGAGTTTTTACAAGAGTGATATTTATAAGAAGTTTCGAGATGAAGCTGAAGCAGAGATGGCCGGAAATAGCGCCGTGGTAGATGCCGGAGCGCCGGAGGCGACGAGGCATCGATAA 1758 49.15 MVAAGQGGGCSNIGTIAVHVITGRWFVVFASLLIMAAAGATYMFSLYSNDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTKRISTPKVWQMCLYICVGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGSDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLGLAGFLMLMIIIESKVMFTQSEFGGSAAVVLLLLFLPLAVVVVEEYNLWKLKTASITAPNPIQIVTEKPNLPKTEPPKQTPQRQKQPSCWTTIFSPPERGEDFTILQALFSMDMLILFFSATCGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFVSEIVLTKYKFPRPLMLSLTLLLSCVGHLMIAFDVPNGLYVASIVIGFCFGAQWPLIFAIISELFGLKYYSTLYNFGSVASPIGLYVLNVKVAGNFYDREAEKQLTAKGLVRKAGEELKCFGGECFKLSFIVITGVTLLGMLVSLILVIRTRSFYKSDIYKKFRDEAEAEMAGNSAVVDAGAPEATRHR 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5379821 5382864 + Tan0002665.1 Tan04g0638 749042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0638 585 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 560 - GO:0016020(PANTHER)
Tan04g0638 585 SUPERFAMILY MFS general substrate transporter 24 269 IPR036259 -
Tan04g0638 585 CDD MFS_Mch1p_like 23 537 - -
Tan04g0638 585 Gene3D MFS general substrate transporter like domains 332 552 IPR036259 -
Tan04g0638 585 Pfam Nodulin-like 24 269 IPR010658 -
Tan04g0638 585 MobiDBLite consensus disorder prediction 294 315 - -
Tan04g0638 585 FunFam Nodulin family protein 332 553 - -
Tan04g0638 585 SUPERFAMILY MFS general substrate transporter 258 549 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2634 Tan-Chr1:41147199 Tan04g0638 Tan-Chr4:5379821 1.20E-191 dispersed
Tan04g0638 Tan-Chr4:5379821 Tan07g0986 Tan-Chr7:23200880 1.00E-142 dispersed
Tan04g0638 Tan-Chr4:5379821 Tan04g0639 Tan-Chr4:5398168 4.00E-208 tandem
Tan11g0923 Tan-Chr11:7498317 Tan04g0638 Tan-Chr4:5379821 6.00E-215 wgd
Tan04g0638 Tan-Chr4:5379821 Tan08g1848 Tan-Chr8:70668131 3.80E-206 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0638 - - - 0.0