Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0664 ATGAATTGCCTTCAAAGCCTTTCAATATCATCTTCTTTGCCGCTGCGACGCTTCAAATGCCGTCAGAGAAAGCCTGAATTCCAGCCCTGCAAGCTGGTGATCAGAAACTTTGCCGATCTACATCGACGTTCTTTCGTGAAGGCAGTATCTGGCTCTACATCAAGTGCCGAAATGAGTGGTGCTGAAGTGGATGATGCCGAGGAAAAGGAGGAAAAATCTGAGATATATAGCCATAACATGACAGAAGCTATGGGTGCTGTATTGACATATAGACATGAGCTGGGAATGAACTACAACTTCATTCGTCCAGATTTAATTGTAGGATCATGCCTACAGACTCCAGAGGATGTTGACAAGCTCCGCAGCATTGGAGTGAAAACAATCTTCTGCTTGCAGCAAGATCCAGATCTGGAATATTTTGGGGTTGACATTGGTGCTATAATAGCATATACAAAGACGTTTGATGATATTGAACATTTGCGAGCTCAAATAAGGGATTTTGATGCATTCGACCTACGGCTAAGATTACCAGCTGTCGTAAGCAAATTACATAAAGCCATAAACCGAAATGGTGGAGTGTCTTATATACATTGCACTGCTGGACTTGGAAGAGCTCCTGCTGTTGCGATGGCTTATATGTTCTGGGTTCAAGGCTACAAACTCAATGAGGCTTTAGAATTACTGCTGAGCAAACGTTCATGCTTCCCAAAAATAGATGCTATTAAAAGTGCAACGGCTGATATTCTTTCAGGATTTAAAAAGAAGCCTATCACTTTATCATGGGAAGATGACCAATGCTCAACTGTAGAAGTATCTGGACTTGATATTGGATGGGGCCAGAGGATTCCATTAAAATTCGACAAGGAACAAGGTGCATGGATTCTCAATAGGGAACTGGCGGAAGGACGATATGAATACAAGTATATTATTGATGGTGTATGGACGTGCAATGGAAACGCGCCCGTCACTCCACCCAACAAAGATGGCCACGTCAACAATTTCATTGAGGTTGTTGATGGCGATGATCCGAGTAGTGATAGAGCAATTCTTCGAGGAAGGTTAACTGGAGATGACCCAGAACTCACGAACGATGAAAGAAGCAAAATAAGACAATTTCTTGAAGCTTGCCCAGATGAAAATTGA 1143 42.52 MNCLQSLSISSSLPLRRFKCRQRKPEFQPCKLVIRNFADLHRRSFVKAVSGSTSSAEMSGAEVDDAEEKEEKSEIYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGVKTIFCLQQDPDLEYFGVDIGAIIAYTKTFDDIEHLRAQIRDFDAFDLRLRLPAVVSKLHKAINRNGGVSYIHCTAGLGRAPAVAMAYMFWVQGYKLNEALELLLSKRSCFPKIDAIKSATADILSGFKKKPITLSWEDDQCSTVEVSGLDIGWGQRIPLKFDKEQGAWILNRELAEGRYEYKYIIDGVWTCNGNAPVTPPNKDGHVNNFIEVVDGDDPSSDRAILRGRLTGDDPELTNDERSKIRQFLEACPDEN 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5646137 5661989 - Tan0019812.1 Tan04g0664 749068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0664 380 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 252 342 - -
Tan04g0664 380 Pfam Glycogen recognition site of AMP-activated protein kinase 256 339 IPR032640 -
Tan04g0664 380 SUPERFAMILY E set domains 255 338 IPR014756 -
Tan04g0664 380 Gene3D Protein tyrosine phosphatase superfamily 90 372 IPR029021 -
Tan04g0664 380 CDD DSP_laforin-like 96 243 IPR045204 GO:0019203(InterPro)
Tan04g0664 380 CDD E_set_AMPKbeta_like_N 256 337 - -
Tan04g0664 380 SMART dsp_5 97 247 IPR020422 GO:0006470(InterPro)
Tan04g0664 380 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 174 232 IPR000387 GO:0016311(InterPro)
Tan04g0664 380 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 94 239 IPR029021 -
Tan04g0664 380 ProSiteProfiles Dual specificity protein phosphatase domain profile. 97 254 IPR020422 GO:0006470(InterPro)
Tan04g0664 380 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 90 271 - -
Tan04g0664 380 Gene3D Immunoglobulins 252 344 IPR013783 -
Tan04g0664 380 Pfam Dual specificity phosphatase, catalytic domain 153 235 IPR000340 GO:0016311(InterPro)
Tan04g0664 380 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 3 379 IPR052832 GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0664 Tan-Chr4:5646137 Tan04g1399 Tan-Chr4:15785389 2.60E-38 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0664 - - - 0.0