Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g0719 | ATGGGGGTGCCTGCAACTCTGGGCGACGATTTTCTGAGAGAAAGAGCGGCGAAGATGAGAGAATCACTGCAAAAGAGCCAAACTATTACTGATAACGTCGTCTCGATTCTCGGCTCCTTTGACCACCGTCTTTCTGCTCTCGAAACCGCCATGCGCCCCACTCAGATCAGAACCAATTCTATTCGTAAAGCCCACGAGAATATTGATAAGACTTTGAAGTCTGCGGAGGTTATTCTAGCACAGTTTGATCTATCTCGTCAGGCAGAAATGAAAATACTTAAAGGACCACATGAGGATTTGGAGAGTTATCTCGGGGCAATTGGTCAATTAAGAAATATTATCAAATTCTTCAGCAGCCATAAAGGTTTTAAGAGTAGTGAGGTAGTGCTTAACCAGGCAAATAATCTGCTTGCAAAAGCCATCTCAAAGCTTGAAGATGAGTTCAGACAGCTATTATCTTCGTACAGCAAACCTGTGGAGCCTGAGCGTCTTTTTGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGACTCTCCTGGTCAACACGATGATTCAGGTGGAAAGAATCCCTCCTCAAATCATCATGCTGCACATCATGATAATAACTTGGAGACTGCTGTCTATACACCTCCCACTCTGATACCACCACGTGTTCTACCACTGCTACACGATTTATCACAGCAGATGGTTCAAGCTGGTCATCAACAGCAAATTCTAAAAGTCTACAGGGATACCCGTTCAGTCGTTCTGGAAGAAAGCCTACGTAAATTGGGAGTTGAAAAACTTAGCAAAGATGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCGGTCAAACTACTGTTTGCTGGAGAACGAAAAGTGTGCGATCAAATATTTGAAGGCTTTGAATCACTTAGAGATCAATCCTTTGCAGAGGTTACCAGTAGTAGTGTGTCTGTGCTATTCAGTTTTGGGGAGGCAATTGCTAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGACATGTATGAAATAATGCGAGAGCTTCACTCAGAGATTGAGACAATTTTCAAGGGTAAAGCATGCAACGAGATACGGGAATCTGCATCGGGTTTGACCAAACGGCTTGCACAGACAGCTAAGGATACATTTGGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTGGATGGAACCGTTCATCCTTTAACAAGCTACGTGATTAATTATGTCAAATTTCTTTTTGACTATCAAGCAACCTTGAAGCAGCTTTTCCAAGAATTTGAAGACAGTGGTCAAACGAGTTCGGAATTGGCCTCTGTCACAATGCAAATAATGCAGGCCCTTCAATCTAATTTGGACGGAAAATCTAAGCATTACAGAGATCCTGCTTTGACTCATTTATTCCTCATGAACAACATTCATTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTTGGGGACGATTGGGTTCAGCGACATAGGAGGGTTGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGCCTCTCTGTTCAAGGGTTAACTTCATCTGGCGGCAGCAGTGTACCTAGTATCGATGGAGGAAACAGTAGCGGAGTTTCTAGGGCGCTTATTAAAGACAGGTTCAAGACTTTCAACATGCAGTTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGATACCGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTAAAACGTTTCGGGCCACTAGTTGATGTTGGAAAGAATCCCCAAAAGTATGTCAGATACCAACCAGAGGATCTCGAAAGGATGCTCGGAGAATTTTTTGAGGGGAAGAACTTGAGCGAACCGAAGCGGTAG | 1962 | 43.07 | MGVPATLGDDFLRERAAKMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKSAEVILAQFDLSRQAEMKILKGPHEDLESYLGAIGQLRNIIKFFSSHKGFKSSEVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSDSPGQHDDSGGKNPSSNHHAAHHDNNLETAVYTPPTLIPPRVLPLLHDLSQQMVQAGHQQQILKVYRDTRSVVLEESLRKLGVEKLSKDDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACNEIRESASGLTKRLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEDSGQTSSELASVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGSSVPSIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLVDVGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKR | 653 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6197485 | 6205493 | - | Tan0008275.1 | Tan04g0719 | 749123 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g0719 | 653 | Pfam | Exocyst complex component Exo70 N-terminal | 71 | 153 | - | - | |
Tan04g0719 | 653 | Pfam | Exo70 exocyst complex subunit C-terminal | 281 | 640 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Tan04g0719 | 653 | Gene3D | Exocyst complex component Exo70 | 76 | 653 | - | - | |
Tan04g0719 | 653 | SUPERFAMILY | Cullin repeat-like | 78 | 644 | IPR016159 | - | |
Tan04g0719 | 653 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 15 | 646 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro) | |
Tan04g0719 | 653 | MobiDBLite | consensus disorder prediction | 168 | 197 | - | - | |
Tan04g0719 | 653 | MobiDBLite | consensus disorder prediction | 171 | 192 | - | - | |
Tan04g0719 | 653 | Coils | Coil | 130 | 150 | - | - | |
Tan04g0719 | 653 | FunFam | Exocyst subunit Exo70 family protein | 86 | 651 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1260 | Tan-Chr3:68895106 | Tan04g0719 | Tan-Chr4:6197485 | 4.90E-276 | dispersed | |
Tan04g0719 | Tan-Chr4:6197485 | Tan04g2073 | Tan-Chr4:74949020 | 1.70E-106 | dispersed | |
Tan04g0719 | Tan-Chr4:6197485 | Tan09g2370 | Tan-Chr9:73415933 | 1.20E-99 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g0719 | K07195 | - | csv:101206262 | 1201.04 |