Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0719 ATGGGGGTGCCTGCAACTCTGGGCGACGATTTTCTGAGAGAAAGAGCGGCGAAGATGAGAGAATCACTGCAAAAGAGCCAAACTATTACTGATAACGTCGTCTCGATTCTCGGCTCCTTTGACCACCGTCTTTCTGCTCTCGAAACCGCCATGCGCCCCACTCAGATCAGAACCAATTCTATTCGTAAAGCCCACGAGAATATTGATAAGACTTTGAAGTCTGCGGAGGTTATTCTAGCACAGTTTGATCTATCTCGTCAGGCAGAAATGAAAATACTTAAAGGACCACATGAGGATTTGGAGAGTTATCTCGGGGCAATTGGTCAATTAAGAAATATTATCAAATTCTTCAGCAGCCATAAAGGTTTTAAGAGTAGTGAGGTAGTGCTTAACCAGGCAAATAATCTGCTTGCAAAAGCCATCTCAAAGCTTGAAGATGAGTTCAGACAGCTATTATCTTCGTACAGCAAACCTGTGGAGCCTGAGCGTCTTTTTGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGACTCTCCTGGTCAACACGATGATTCAGGTGGAAAGAATCCCTCCTCAAATCATCATGCTGCACATCATGATAATAACTTGGAGACTGCTGTCTATACACCTCCCACTCTGATACCACCACGTGTTCTACCACTGCTACACGATTTATCACAGCAGATGGTTCAAGCTGGTCATCAACAGCAAATTCTAAAAGTCTACAGGGATACCCGTTCAGTCGTTCTGGAAGAAAGCCTACGTAAATTGGGAGTTGAAAAACTTAGCAAAGATGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCGGTCAAACTACTGTTTGCTGGAGAACGAAAAGTGTGCGATCAAATATTTGAAGGCTTTGAATCACTTAGAGATCAATCCTTTGCAGAGGTTACCAGTAGTAGTGTGTCTGTGCTATTCAGTTTTGGGGAGGCAATTGCTAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGACATGTATGAAATAATGCGAGAGCTTCACTCAGAGATTGAGACAATTTTCAAGGGTAAAGCATGCAACGAGATACGGGAATCTGCATCGGGTTTGACCAAACGGCTTGCACAGACAGCTAAGGATACATTTGGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTGGATGGAACCGTTCATCCTTTAACAAGCTACGTGATTAATTATGTCAAATTTCTTTTTGACTATCAAGCAACCTTGAAGCAGCTTTTCCAAGAATTTGAAGACAGTGGTCAAACGAGTTCGGAATTGGCCTCTGTCACAATGCAAATAATGCAGGCCCTTCAATCTAATTTGGACGGAAAATCTAAGCATTACAGAGATCCTGCTTTGACTCATTTATTCCTCATGAACAACATTCATTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTTGGGGACGATTGGGTTCAGCGACATAGGAGGGTTGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGCCTCTCTGTTCAAGGGTTAACTTCATCTGGCGGCAGCAGTGTACCTAGTATCGATGGAGGAAACAGTAGCGGAGTTTCTAGGGCGCTTATTAAAGACAGGTTCAAGACTTTCAACATGCAGTTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGATACCGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTAAAACGTTTCGGGCCACTAGTTGATGTTGGAAAGAATCCCCAAAAGTATGTCAGATACCAACCAGAGGATCTCGAAAGGATGCTCGGAGAATTTTTTGAGGGGAAGAACTTGAGCGAACCGAAGCGGTAG 1962 43.07 MGVPATLGDDFLRERAAKMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKSAEVILAQFDLSRQAEMKILKGPHEDLESYLGAIGQLRNIIKFFSSHKGFKSSEVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSDSPGQHDDSGGKNPSSNHHAAHHDNNLETAVYTPPTLIPPRVLPLLHDLSQQMVQAGHQQQILKVYRDTRSVVLEESLRKLGVEKLSKDDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACNEIRESASGLTKRLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEDSGQTSSELASVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGSSVPSIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLVDVGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKR 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6197485 6205493 - Tan0008275.1 Tan04g0719 749123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0719 653 Pfam Exocyst complex component Exo70 N-terminal 71 153 - -
Tan04g0719 653 Pfam Exo70 exocyst complex subunit C-terminal 281 640 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Tan04g0719 653 Gene3D Exocyst complex component Exo70 76 653 - -
Tan04g0719 653 SUPERFAMILY Cullin repeat-like 78 644 IPR016159 -
Tan04g0719 653 PANTHER EXOCYST COMPLEX PROTEIN EXO70 15 646 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Tan04g0719 653 MobiDBLite consensus disorder prediction 168 197 - -
Tan04g0719 653 MobiDBLite consensus disorder prediction 171 192 - -
Tan04g0719 653 Coils Coil 130 150 - -
Tan04g0719 653 FunFam Exocyst subunit Exo70 family protein 86 651 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1260 Tan-Chr3:68895106 Tan04g0719 Tan-Chr4:6197485 4.90E-276 dispersed
Tan04g0719 Tan-Chr4:6197485 Tan04g2073 Tan-Chr4:74949020 1.70E-106 dispersed
Tan04g0719 Tan-Chr4:6197485 Tan09g2370 Tan-Chr9:73415933 1.20E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0719 K07195 - csv:101206262 1201.04