Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g0826 | ATGTTAACCACGTTTACGCCCATTCATAACACCGACGGCGGCGGAGCCGTCGCCGCTACGGCTGCACCTCCTCCGGTGAACTCGGCAATGGAATCATGCTCGAGAATCTTCGACTTGGAGTCTCCTATTATCATATTTGTTTTCTTTCACAAGGCTATTCGCGCGGAGCTTGATCACTTCCATCGCGACGCCATGGAATTCGCCACCAACCAGCAAAGTGGCGGGGATATTGGGCCGTTGTTGCAGCGCTACCACTTCCTTCGAGCTGTTTATAAGCATCACTGTAACGCTGAGGACGAGGTCATCTTCCCAGCTCTAGATCTGCGAGTGAAAAATGTGGCAAGTACTTATTTCCTTGAACATGAAGGGGAAAGTGTTCTGTTTTGCCAATTGCTCGAGCTTCTGAATTCAAATGCCTTGGAGGAAGGAAGCTATAAGAGGGAGCTGTCATCTTGTGTCAGAGCTCTTCAGATATCAATATGCCAGCATATGTTCAAGGAAGAGGAACAGGTGTTTCCGTTACTTACTGAGAAGTTTTCTTTTGAAGAGCAGGCATCATTAGTTTGGAAATTTCTTTGTAGTATACCTATTAATATGCTGGAAGTCTTTCTTCCGTGGCTTTCTTCCTCTATATCTCCAGATGAACATCAGATTATGAGCAAATGCTTGAGCAAAATTATCCCCCAGCAAAAGCTTCTTCAGAAGGTCATATTTTCCTGGATGGAGAATGCAAGAACGACGTGTGCAAATCAAAGTTTGTATGATGACAATCTAGAGTTTCAATGTCTACACTCTCCGGTCCGTGATCTTATATGTAGGCCACAGAAGGGGAATAGCACTTCTGAATCAACTAGAAGTGGTAAAAGGAAATACGTGGAGCAATGTAATTTTACCTATTCTACTGCTTCAGTTGCTTGTCCCATCAACGAAATATTACATTGGCATAATGCTATAAAAAAAGAACTAAATAGCATAGCTGAGGCAGCTAGGGACGTACCATTGTCTCCTGATTTTTCTGAGTTGTCTGCACTCAAGGAGAGGCTGCAGTTTATTGGGGAAGTCTGCATCTTCCACTGCATTGCTGAGGATAAAGTTATATTCCCTGCTGTAGATGCTGAACTATCATTTGCTGATCAGCACGCAGAAGAAGAAATCCAATTTGATAACCTTAGGCTCTTGATAGAAAGTATTCAAGCTGATAGACTTAAATATACTTCTGCTGAAATTCATAAAAAGTTAAGTTCTCATGCTGATCAAATTATCAAGACCATCCAAAAGCACTTCCATGATGAGGAAATGCATGTTCTTCCACTTGCTCGGAAGCATTTGGGACCCCAAAGGCAGCGAGAACTTCTGTATCACAGCTTATGCATAATGCCCTTGAAATGGATAGAACGTGTCTTACCTTGGTTGGTAGAAACACTTACTGAAGAAGAGGCAAGATCGTTTCTTCAGAATATGCAAATGGCAGCTCCAGTGTCGGATCATGCGCTCGTTACACTATTTTCTGGTTGGGCATGCAAAGGCCATCCCATGAGCATTTGTATTTCTGCAAGTGCTATTAGCTATTGTCCTGAACGGATATTTACTGGAGATGAAGAATCATGCTCCTTTTCTTCTGCCAATGAAAAACCTTCATGCAATCAGGCAACTGAGTGTGCGAGGCTATCCAATTGTGGGAAGGCAGCATGCCATGGAGATTTAAATGGCCGTCTTCCTTTGAAAAACCCAAGCAAAAAACTTCATTTCACTCATGTAAAACAACTTGCTTGTGTTCCTGGGTTAGGAGTGGATGACAATAATTTAGGAATGAGACCCCTGGCAGCAGCAAAATCACTGCGTTCTTTGTGTTTTGGTCCCTATGCTCCTTCTCTCAACTCCAGTCTGTTTAGTCTGGAAAATGAACCAACCTCTTGTGGCAGTGGTTCTAAGTCACGGCCTATCGATAACATATTTAAATTTCATAAAGCAATAAGCAAAGACTTGGAGTATTTGGATAATGAATCTGTGAATCTTGGTGATTGCGATGACAATTTCTTTAGGAAATTTTGTGGTAGGTTTCATCTGTTGTGGGGTCTATATAAAGCTCATAGTAACGCAGAGGATGATATAGTATTTCCTGCATTAGAATCAAAAGAAGCTCTTCATAATGTAAGCCACTCTTATACATTAGACCACAAACAAGAGGAAGAGCTTTTTGAAGGTATTTCTACTGCACTTTCTAAGCTGACAAATATTCGCAGAGACTTGAATGGTAAGAAAAAGTATGACTATTCAAATTGGACGAAGTCTCATACCTCTGATATTAATGATACTGTGAGAATGAATATTGAGCTGGCAACAAAGCTCCAGGGCATGTGCAGATCAATTAGAGTGACACTTGACCAACATATTTTTCGTGAGGAATCGGAGTTGTTGCCATTGTTTCATACATATTTTTCTGTGGAAGAACAGGATAAAATTGTTGGTAGAATAATTGGTACTACAGGTGCTGAGGTCCTCCAATCAATGTTGCCTTGGGTAACTTCTGCACTTACTCGGGAGGAGCAAAATAAGATGATGGATACATTGAAGCAGGCAACCAGAAATACAATGTTTAGTGACTGGCTAAATGAATGGTGGGAAGGACCTGCTACATCTCCACATTACATGGAAACTATCAGTCATATATCTGGAGGTTCTGATTCCCATGGCTTCTGTGACCAAAAAAATGATTCAGTTTTCAAGCCTGGATGGAAAGAGATTTTTAGGATGAACGAAAATGAACTTGAATCGGAAATAAGAAAGGTTGCTCGGGATTCAACCATTGACCCTAGGAGAAAGGATTATCTTATCCAGAACTTGATGACCAGTCGCTGGATAGCTTCTCAGCAGATGCTACCCCAAGCAACTACAGGTGAGAACTCAGATGCAAAAGAACTGATCGCAAGTGCCCCATCATTTCGTGATCCTAAGAAACAGACTTTTGGGTGTGAGCATTATAAAAGAAATTGTAAGCTGCTTGCAACATGTTGCGGCAAGTTGTTTACTTGTAGTTTCTGTCATGATAAAGTCAGTGATCATTCAATGGACAGGAAGGCTTCAACTGAAATGATGTGTATGCGCTGCCTCAAAGTTCAGCCTATTGGATCTGTTTGCACAACACCATCCTGTGGTGGTCTCTCTATGGCAAAGTACTACTGTAGTATTTGCAAACTTTTTGACGATGAAAGGGAAGTCTATCATTGCCCTTTCTGCAATATATGTCGTCTTGGGAAGGGGCTTGGTACTGATTTTTTTCATTGTATGACATGCAATTGTTGTTTGGCAATGAAGTTGGTTGATCACAAGTGCCAAGAGAGGGGCCTAGAAACAAATTGCCCCATCTGCTGTGATTTTTTGTTCACATCTAGTGAAAGTGTTAGAGCTCTTCCTTGTGGACATTTCATGCATTCAGCTTGTTTCCAGGCTTACACTTGTAGCCACTACATATGTCCAATATGTAGCAAATCCTTAGGAGATATGACGGTATGGAAATTTCTATCTCAAACAAAAGCATGA | 3540 | 41.44 | MLTTFTPIHNTDGGGAVAATAAPPPVNSAMESCSRIFDLESPIIIFVFFHKAIRAELDHFHRDAMEFATNQQSGGDIGPLLQRYHFLRAVYKHHCNAEDEVIFPALDLRVKNVASTYFLEHEGESVLFCQLLELLNSNALEEGSYKRELSSCVRALQISICQHMFKEEEQVFPLLTEKFSFEEQASLVWKFLCSIPINMLEVFLPWLSSSISPDEHQIMSKCLSKIIPQQKLLQKVIFSWMENARTTCANQSLYDDNLEFQCLHSPVRDLICRPQKGNSTSESTRSGKRKYVEQCNFTYSTASVACPINEILHWHNAIKKELNSIAEAARDVPLSPDFSELSALKERLQFIGEVCIFHCIAEDKVIFPAVDAELSFADQHAEEEIQFDNLRLLIESIQADRLKYTSAEIHKKLSSHADQIIKTIQKHFHDEEMHVLPLARKHLGPQRQRELLYHSLCIMPLKWIERVLPWLVETLTEEEARSFLQNMQMAAPVSDHALVTLFSGWACKGHPMSICISASAISYCPERIFTGDEESCSFSSANEKPSCNQATECARLSNCGKAACHGDLNGRLPLKNPSKKLHFTHVKQLACVPGLGVDDNNLGMRPLAAAKSLRSLCFGPYAPSLNSSLFSLENEPTSCGSGSKSRPIDNIFKFHKAISKDLEYLDNESVNLGDCDDNFFRKFCGRFHLLWGLYKAHSNAEDDIVFPALESKEALHNVSHSYTLDHKQEEELFEGISTALSKLTNIRRDLNGKKKYDYSNWTKSHTSDINDTVRMNIELATKLQGMCRSIRVTLDQHIFREESELLPLFHTYFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTREEQNKMMDTLKQATRNTMFSDWLNEWWEGPATSPHYMETISHISGGSDSHGFCDQKNDSVFKPGWKEIFRMNENELESEIRKVARDSTIDPRRKDYLIQNLMTSRWIASQQMLPQATTGENSDAKELIASAPSFRDPKKQTFGCEHYKRNCKLLATCCGKLFTCSFCHDKVSDHSMDRKASTEMMCMRCLKVQPIGSVCTTPSCGGLSMAKYYCSICKLFDDEREVYHCPFCNICRLGKGLGTDFFHCMTCNCCLAMKLVDHKCQERGLETNCPICCDFLFTSSESVRALPCGHFMHSACFQAYTCSHYICPICSKSLGDMTVWKFLSQTKA | 1179 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7030918 | 7038964 | + | Tan0008373.2 | Tan04g0826 | 749230 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g0826 | 1179 | ProSiteProfiles | Zinc finger RING-type profile. | 1120 | 1162 | IPR001841 | - | |
Tan04g0826 | 1179 | SMART | ring_2 | 1120 | 1161 | IPR001841 | - | |
Tan04g0826 | 1179 | ProSiteProfiles | Zinc finger CHY-type profile. | 984 | 1053 | IPR008913 | GO:0008270(InterPro) | |
Tan04g0826 | 1179 | SUPERFAMILY | CHY zinc finger-like | 984 | 1047 | IPR037274 | GO:0008270(InterPro) | |
Tan04g0826 | 1179 | FunFam | Zinc finger protein BRUTUS | 642 | 872 | - | - | |
Tan04g0826 | 1179 | Pfam | Hemerythrin HHE cation binding domain | 307 | 439 | IPR012312 | - | |
Tan04g0826 | 1179 | Pfam | Hemerythrin HHE cation binding domain | 647 | 808 | IPR012312 | - | |
Tan04g0826 | 1179 | Pfam | Hemerythrin HHE cation binding domain | 46 | 175 | IPR012312 | - | |
Tan04g0826 | 1179 | SUPERFAMILY | RING/U-box | 1119 | 1167 | - | - | |
Tan04g0826 | 1179 | CDD | RING-H2_Pirh2-like | 1119 | 1162 | - | - | |
Tan04g0826 | 1179 | Gene3D | nmb1532 protein domain like | 41 | 193 | - | - | |
Tan04g0826 | 1179 | Gene3D | nmb1532 protein domain like | 308 | 454 | - | - | |
Tan04g0826 | 1179 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1115 | 1164 | IPR013083 | - | |
Tan04g0826 | 1179 | SUPERFAMILY | Zinc hairpin stack | 1057 | 1112 | IPR037275 | - | |
Tan04g0826 | 1179 | Gene3D | nmb1532 protein domain like | 642 | 867 | - | - | |
Tan04g0826 | 1179 | Pfam | Ring finger domain | 1119 | 1161 | IPR001841 | - | |
Tan04g0826 | 1179 | Pfam | CHY zinc finger | 991 | 1059 | IPR008913 | GO:0008270(InterPro) | |
Tan04g0826 | 1179 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 1056 | 1119 | IPR017921 | - | |
Tan04g0826 | 1179 | FunFam | Zinc finger protein-related isoform 1 | 1115 | 1164 | - | - | |
Tan04g0826 | 1179 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 682 | 1174 | - | - | |
Tan04g0826 | 1179 | CDD | Hr-like | 310 | 437 | - | - | |
Tan04g0826 | 1179 | CDD | Hr-like | 651 | 807 | - | - | |
Tan04g0826 | 1179 | CDD | Hr-like | 45 | 173 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0826 | Tan-Chr4:7030918 | Tan04g0833 | Tan-Chr4:7031172 | 0.00E+00 | dispersed | |
Tan04g0826 | Tan-Chr4:7030918 | Tan04g0827 | Tan-Chr4:7030918 | 0.00E+00 | tandem | |
Tan04g0826 | Tan-Chr4:7030918 | Tan09g1882 | Tan-Chr9:70042500 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g0826 | K16276 | - | csv:101217252 | 2015.74 |