Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g0901 | ATGCGTGGGGAGGATCAAGAAGAAGAGCATCGTCATCATCATCAAGGGGAGTGTTCACAAACAATTGAGAATATGTTTCAAGAACAGCTTCTTCTTCACCAACAGCTACAAAACAATAACAACAACAACAACACTGATCATATTATATATGGAGATCATCTCCATCATGGAACTGGAAGAGGGTTGATTTTCCCGGCCGAAGTCGTGTCGCCGGTTCTGCAGCCATGGCCACCGCTCAACCCATTTTTGATCCCTCCTCCACCTCCGCCGCCGCCACCGACATCATTATGCTCGTCGTCGTCATACGGTAGTTTGTTTAACCGGAGACCTCCTAATTGTCTTCAGTTTGCTTATGATGGTCCATCCTCGGCGGACCACCTGGGCCGGATCCTATCGACCACGCTCGGACCGGTGGTTCATCCCGGTTCAACGGCTCCCTTTGGGCTACAAGCTGAGCTTGGCAAAATGAGTGCTCAAGAAATAATGGATGCTAAAGCTCTTGCAGCTTCTAAAAGCCACAGTGAAGCTGAGAGGAGAAGAAGAGAAAGAATCAACAATCATCTTGCTAAGCTTCGGAGCTTACTTCCTAGTACCACTAAAACAGACAAAGCTTCACTGCTAGCAGAAGTAATACAACACGTGAAAGAGCTAAAACGGCAAACATCATTGATAGCAGAAACAAGTCCAATCCCAACAGAAGTTGACGAGGTAACTGTGGACGATGCCTCCGACGAGATCATCGGCGGCGGTGGCGGTGGCGGTGGCAATAAATTTGTAATAAAGGCGTCTCTTTGCTGTGAGGACCGTTCAGATCTTCTCCCTGACCTCATAAAAACGCTGAAATCGTTGCGTTTAAGAACCCTCAAAGCTGAAATCACAACCCTTGGTGGTCGTGTAAGAAATGTCTTGTTTGTCACTGGTGAAGAAGACGAGGATTCAACAACCACTGATCATAATAATAATAGTAATAGTAATGATAATAATAATAATAATAATCCCAATTCCGACAACCAACACCAACAACAACTTAATATCAGCTCAATTCAAGAAGCACTGAAGGCTGTGATGGAAAAAACAGGAGGGGATGATTCATCTTCAGCAAATATTAAAAGACAAAGGACAAATAATAACATCAATATCCTTTAA | 1146 | 44.42 | MRGEDQEEEHRHHHQGECSQTIENMFQEQLLLHQQLQNNNNNNNTDHIIYGDHLHHGTGRGLIFPAEVVSPVLQPWPPLNPFLIPPPPPPPPPTSLCSSSSYGSLFNRRPPNCLQFAYDGPSSADHLGRILSTTLGPVVHPGSTAPFGLQAELGKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDEVTVDDASDEIIGGGGGGGGNKFVIKASLCCEDRSDLLPDLIKTLKSLRLRTLKAEITTLGGRVRNVLFVTGEEDEDSTTTDHNNNSNSNDNNNNNNPNSDNQHQQQLNISSIQEALKAVMEKTGGDDSSSANIKRQRTNNNINIL | 381 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7777428 | 7780326 | - | Tan0015838.1 | Tan04g0901 | 749305 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g0901 | 381 | MobiDBLite | consensus disorder prediction | 361 | 381 | - | - | |
Tan04g0901 | 381 | SMART | finulus | 174 | 223 | IPR011598 | GO:0046983(InterPro) | |
Tan04g0901 | 381 | CDD | bHLH_AtAIG1_like | 163 | 240 | - | - | |
Tan04g0901 | 381 | Gene3D | - | 163 | 224 | IPR036638 | GO:0046983(InterPro) | |
Tan04g0901 | 381 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 172 | 223 | IPR036638 | GO:0046983(InterPro) | |
Tan04g0901 | 381 | FunFam | transcription factor bHLH30 | 163 | 226 | - | - | |
Tan04g0901 | 381 | MobiDBLite | consensus disorder prediction | 307 | 340 | - | - | |
Tan04g0901 | 381 | MobiDBLite | consensus disorder prediction | 357 | 381 | - | - | |
Tan04g0901 | 381 | Pfam | Helix-loop-helix DNA-binding domain | 171 | 218 | IPR011598 | GO:0046983(InterPro) | |
Tan04g0901 | 381 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 144 | 374 | IPR045847 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan04g0901 | 381 | MobiDBLite | consensus disorder prediction | 317 | 340 | - | - | |
Tan04g0901 | 381 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 168 | 217 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0901 | Tan-Chr4:7777428 | Tan10g1588 | Tan-Chr10:26787737 | 1.10E-36 | dispersed | |
Tan02g2483 | Tan-Chr2:93417581 | Tan04g0901 | Tan-Chr4:7777428 | 1.30E-27 | transposed | |
Tan03g1804 | Tan-Chr3:73676387 | Tan04g0901 | Tan-Chr4:7777428 | 3.90E-16 | transposed | |
Tan05g0726 | Tan-Chr5:5184794 | Tan04g0901 | Tan-Chr4:7777428 | 1.20E-29 | transposed | |
Tan11g1947 | Tan-Chr11:31004043 | Tan04g0901 | Tan-Chr4:7777428 | 1.40E-80 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27203 | PF00010 | HLH | 1.90E-12 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g0901 | - | - | - | 0.0 |