Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g0906 | ATGGCCGCAGCATTGTCCTCACTGGCCCCATTACTCATTTTTGCCAGAATTTTTGGTCTGCTTGTTGCTGTTCTTGTCTTCGTTTGGGCTTTTGCTTTCAGTTCTAGCTTCGGCCATCTCCCCCCCTCCCGGGATGACCATATCTTCGATGTTCTGCATCCTTTGTTCATGGTAATTGGTCTCATTCTCCTCAGCGGAGAAGCAATTTTGGTTCATAGTTGGCTGCCTGGTTCGAGGAATTTGAGGAAATCTGTTCATCTGATTCTTCAAGGATTGGCTTTGGCTTCTGGGATTGTTGGAATTTGGACTAAGTTTCATTGGGATCGTGGCTTTTTGGCTAATTTCCACAGTTTGCATTCTTGGATGGGTTTGATGGTTGTCACTTTGTTCGGAGCTCAGTGGATGATGGGATTTCTGAGCTTCTGGCATTGGAGAGAGGTTAGAGCAACAAGAGAAAGAGTGCTGCCATGGCATGTATTCCTTGGATTGTACAGTTATGCATTGGCAGTGACAGCAGCAGAAACAGGGCTTCTTGAGAAATTGACATTGTTGCAAACAAAGAGAAATGTCCCAAGGAAGGGCTCTGAAGCCATGGTTGTCAACAGTTTAGGCCTGACCTTGGCTTTGCTGGGTGGAATTGTGGTGCTTACTGCTATATCTCCTAAATATCCTCCTTCCCTTCCCACCATCAAACAGCCGGTTTTCTCTAATTCAAAGCCCTTGCCTTCTTAA | 732 | 45.77 | MAAALSSLAPLLIFARIFGLLVAVLVFVWAFAFSSSFGHLPPSRDDHIFDVLHPLFMVIGLILLSGEAILVHSWLPGSRNLRKSVHLILQGLALASGIVGIWTKFHWDRGFLANFHSLHSWMGLMVVTLFGAQWMMGFLSFWHWREVRATRERVLPWHVFLGLYSYALAVTAAETGLLEKLTLLQTKRNVPRKGSEAMVVNSLGLTLALLGGIVVLTAISPKYPPSLPTIKQPVFSNSKPLPS | 243 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 7825435 | 7828133 | - | Tan0015892.1 | Tan04g0906 | 749310 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g0906 | 243 | Pfam | Eukaryotic cytochrome b561 | 52 | 182 | IPR006593 | - | |
| Tan04g0906 | 243 | SMART | 561_7 | 52 | 177 | IPR006593 | - | |
| Tan04g0906 | 243 | FunFam | Cytochrome b reductase 1 | 4 | 226 | - | - | |
| Tan04g0906 | 243 | ProSiteProfiles | Cytochrome b561 domain profile. | 14 | 219 | IPR006593 | - | |
| Tan04g0906 | 243 | PANTHER | CYTOCHROME B561-RELATED | 3 | 223 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Tan04g0906 | 243 | Gene3D | - | 1 | 224 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g0906 | Tan-Chr4:7825435 | Tan11g0367 | Tan-Chr11:2979307 | 2.20E-51 | dispersed | |
| Tan04g0906 | Tan-Chr4:7825435 | Tan04g0907 | Tan-Chr4:7825435 | 2.40E-98 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g0906 | K08360 | - | csv:101205948 | 419.853 |