Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0907 ATGTTGATCTGTGAAATGGGCATCATGTGTTTGTTCTTTTGTTGTGATTTTTCAGCAATTTTGGTTCATAGTTGGCTGCCTGGTTCGAGGAATTTGAGGAAATCTGTTCATCTGATTCTTCAAGGATTGGCTTTGGCTTCTGGGATTGTTGGAATTTGGACTAAGTTTCATTGGGATCGTGGCTTTTTGGCTAATTTCCACAGTTTGCATTCTTGGATGGGTTTGATGGTTGTCACTTTGTTCGGAGCTCAGTGGATGATGGGATTTCTGAGCTTCTGGCATTGGAGAGAGGTTAGAGCAACAAGAGAAAGAGTGCTGCCATGGCATGTATTCCTTGGATTGTACAGTTATGCATTGGCAGTGACAGCAGCAGAAACAGGGCTTCTTGAGAAATTGACATTGTTGCAAACAAAGAGAAATGTCCCAAGGAAGGGCTCTGAAGCCATGGTTGTCAACAGTTTAGGCCTGACCTTGGCTTTGCTGGGTGGAATTGTGGTGCTTACTGCTATATCTCCTAAATATCCTCCTTCCCTTCCCACCATCAAACAGCCGGTTTTCTCTAATTCAAAGCCCTTGCCTTCTTAA 585 43.59 MLICEMGIMCLFFCCDFSAILVHSWLPGSRNLRKSVHLILQGLALASGIVGIWTKFHWDRGFLANFHSLHSWMGLMVVTLFGAQWMMGFLSFWHWREVRATRERVLPWHVFLGLYSYALAVTAAETGLLEKLTLLQTKRNVPRKGSEAMVVNSLGLTLALLGGIVVLTAISPKYPPSLPTIKQPVFSNSKPLPS 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7825435 7828133 - Tan0015892.2 Tan04g0907 749311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0907 194 PANTHER CYTOCHROME B561-RELATED 12 174 IPR043205 GO:0016491(InterPro)|GO:0016491(PANTHER)
Tan04g0907 194 SMART 561_7 7 128 IPR006593 -
Tan04g0907 194 ProSiteProfiles Cytochrome b561 domain profile. 1 170 IPR006593 -
Tan04g0907 194 Gene3D - 6 175 - -
Tan04g0907 194 Pfam Eukaryotic cytochrome b561 12 133 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0907 Tan-Chr4:7825435 Tan11g0367 Tan-Chr11:2979307 1.40E-37 dispersed
Tan04g0906 Tan-Chr4:7825435 Tan04g0907 Tan-Chr4:7825435 2.40E-98 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0907 K08360 - csv:101205948 322.398