Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0916 ATGCCGTCGCCTCAGATCCTACCTATAACCCAGCCCCCTTCGTCCTCTCCATTTTCCTCCGGGAGCTCAGCCGCCAATTCGATTATGGCAACCACATCTACTGCCATAGATGTAATTTTGCTTAAAGAGGACGATGAACAGAGAACTGGAGTTCTTGTTTCTCCGTTGTTCGAGGATGATAAGCCGATAGCTTATAAGTCTCTTCTTCCTAGGACTTCAAGCTATGCCTCCACCACATCCAGTTCATCCTCCGGAAGCAATATGTATAAGCAGAAGCGGAGGCGAGTCAAGAGTGAAGACTGTTTGTCCCTTCTCTCCGGTGACAGCCGCCACCAGGCTGTTGACCGTGATGTCGATAATGCCAATGTTCAGAGAACTGAGAGATTTCTACTTACCCGTTTCGGTTTTAAACTCTCGAAATATATTAGGGTAGCATTCAGATGGATTGCAAGGTTTCTCGCACTTGGCTGTTATTCATTGTTTCTTCTCCCAGGATTTCTTCAAGTTGGATACTACTATTTCTCATCCAGTCAGATACGCAGAAGTATACCCTATGGTGATAAACCAAGGAACAAGTTGGATCTTTATCTACCAAAACATATTGATGGGCCAAAACCAGTTGTTGCATTTATCACTGGCGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCAGAAAGAGATGTCATTGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACTATGGGTGATATGATTGACGATGCTTCCCAAGGAATCTCGTTCTTGTGTAATAACATCAGAGAATTTGGAGGGGATCCAAGCAGAATTTTTCTAATGGGCCAGTCAGCTGGCGCACATATAGCTGCCTGCACACTTTTGGAGCAAGCAATGAAAGAGGTTCGCAAAGTAGAAAGTATCTCATGGAGTGTGTCCCAGATTAAAGCTTTCTTTGGTTTGTCAGGAGGGTATAATTTGCTTCATCTGGTTGACTATTTTCACTCTCGTGGTCTCTATCGTTCTCTTTTTCTGAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAAGTAATGATCCTGGAAGAACCTAACATGGGAGCTGCCGTCTCGATTCTTCCTCCCGTCGTTTTATTTCATGGAACCGCAGACTATTCTATACCATCAGATGCTAGTAAAACTTTTGCTGAGACTCTTCGAAGTGTTGGAGTGAAAGCTGAGGCATTTTTCTACGAAGGAAAGACGCATACAGATGTATTTGTTCAGGATCCACTGAGGGGTGGCAGAGATCAGATGTTTGAAGATCTTGTCGCAATCATCCATGCTGATGATGCAGAAGCGCAGGCGAAAGATGCAGTGGCACCTCCAAGAAGACGCCTTGTACCCGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCTTTCTAA 1440 44.31 MPSPQILPITQPPSSSPFSSGSSAANSIMATTSTAIDVILLKEDDEQRTGVLVSPLFEDDKPIAYKSLLPRTSSYASTTSSSSSGSNMYKQKRRRVKSEDCLSLLSGDSRHQAVDRDVDNANVQRTERFLLTRFGFKLSKYIRVAFRWIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMGDMIDDASQGISFLCNNIREFGGDPSRIFLMGQSAGAHIAACTLLEQAMKEVRKVESISWSVSQIKAFFGLSGGYNLLHLVDYFHSRGLYRSLFLSIMEGEQSLKRFSPEVMILEEPNMGAAVSILPPVVLFHGTADYSIPSDASKTFAETLRSVGVKAEAFFYEGKTHTDVFVQDPLRGGRDQMFEDLVAIIHADDAEAQAKDAVAPPRRRLVPEFMLMLARSVSPF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7948985 7952866 - Tan0003054.1 Tan04g0916 749320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0916 479 Gene3D alpha/beta hydrolase 173 428 IPR029058 -
Tan04g0916 479 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
Tan04g0916 479 MobiDBLite consensus disorder prediction 74 95 - -
Tan04g0916 479 SUPERFAMILY alpha/beta-Hydrolases 181 441 IPR029058 -
Tan04g0916 479 MobiDBLite consensus disorder prediction 74 89 - -
Tan04g0916 479 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 174 428 - -
Tan04g0916 479 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 92 445 IPR050300 GO:0016298(PANTHER)
Tan04g0916 479 MobiDBLite consensus disorder prediction 1 24 - -
Tan04g0916 479 Pfam BD-FAE 193 403 IPR049492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0916 Tan-Chr4:7948985 Tan04g1990 Tan-Chr4:70562333 2.80E-135 dispersed
Tan04g0916 Tan-Chr4:7948985 Tan04g0917 Tan-Chr4:7948985 1.70E-204 tandem
Tan11g1985 Tan-Chr11:35036694 Tan04g0916 Tan-Chr4:7948985 1.40E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0916 K15889 - csv:101206426 837.41