Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0924 ATGAGCGGCGGCAGAAGGAGAAAGCTGCATTTTAGCAAGATCTACTCGTTTGCATGTGGGAAAGCTTCTTTAAAAGATGACCATTCACAAATTGGGGGTCCGGGGTTTTCTCGGGTTGTTTTCTGCAATGAACCAGACTGTTTTGAGGCTGAAATTCGTAACTACGTAGGCAATTATGTTAGTACCACCAAGTATACTTTAGCTACTTTCCTGCCTAAGTCCTTGTTTGAGCAATTCAGGAGGGTGGCCAATTTCTACTTTTTAGTCAGCGGGATCCTTGCTTTTACTCCCCTTGCTCCTTACACGGCTGTCAGCGCAATTCTCCCTCTTATTCTTGTCATTTCGGCTACGATGATCAAAGAAGGTATCGAAGATTGGAGGCGAAAAAAACAGGATATTGAGGTTAACAATAGAAAGGTTAAAGTGCATCAAGGTGATGGAGTTTTTGCTTATACAGAGTGGATGAATCTGAAGGTGGGTAACATTGTGAAAGTGGAGAAGGATGAATTCTTTCCAGCAGATATCATCTTGCTTTCATCCAGTTACGAGGATGCAGTCTGCTATGTCGAGACAATGAACCTTGATGGTGAGACAAATTTGAAACTAAAACAAGCATTGGAGGTAACTTCGCATATGAATGAGGATTCTATCTTCAGCAGCTTTAAGGCTATCATAAAATGTGAGGATCCAAATGCAAATTTATACAGTTTTGTTGGTAGTATGGAGTTGGAAGAGCAACAATATCCTCTATCTCCTCAACAATTACTCCTTCGAGACTCTAAACTCAGGAATACAGATTATATATATGGGGTTGTTGTCTTTACTGGTCGCGACACAAAGGTTATTCAAAATTCTACCGACCCACCTTCAAAGAGAAGCAAAGTTGAGAGGAAGATGGATAAAATTATATATTTTTTGTTCTGTCTTCTATTTTTGCTTGCTTTCATAGGATCTATATTTTTTGGCCTTGCGACTGGTGATGATTTGGAAAATGGGAGAATGAAGAGATGGTATCTCAGGCCTGATGATGCCAAAGTTTTCTTTGATCCAAAAAGGGCTCCATTAGCTGCAATTTTCCATTTTCTTACAGCACTGATGTTATATAACTACTTCATTCCAATCTCACTATATGTATCGATAGAAATTGTCAAGGTTCTTCAGAGTATATTTATCAATCAAGATATTAATATGTACTATGAAGAAGCTAATAAACCTGCACGTGCTCGCACCTCAAATTTGAATGAAGAACTTGGTCAAGTCGATACGATACTTTCTGACAAGACTGGAACTCTAACCTGTAATTCAATGGAGTTCATTAAGTGTTCAGTGGCAGGGAGGGCTTATGGACGTGGTTTCACAGAGGTAGAAAGGGCCATGGGTAGACAAAGAGATTCACCACTGCATAAAGCTGTCAATGGGGGGAATCACCGAGAGGATGTCACTAATAACACTACACATATCAAGGGCTTTAATTTTAAGGATGATAGGGTTATGAATGGGAACTGGGTTAATGAGCCTCATGCAAATGTCATTCAAATGTTTTTTCGTCTTCTTGCTACTTGTCATACGGCAATACCTGAAATCAATGAGGAAAGCGGAGAAGTTTCTTATGAGGCTGAATCACCAGATGAAGCAGCATTTGTGATTGCAGCTAGGGAACTCGGCTTTGAGTTCTACAAAAGAACACAGACAAGCATATCACTGCATGAGTTTGATCCTTCATTGGGCAAGAAAGTTGATAGGACATATAAACTGTTGCATGTTTTGGAGTTTAATAGTTCAAGAAAGCGGATGTCTGTCATAGTAAGAAACGAGGAGGAGAAAATATTATTATTCTGTAAAGGTGCAGACAGTGTCATGTTTGAAAGGCTTGGAAAGAAGGGAAGGGAGTTTGAAGAGGAGACTAAGGAACATGTCAGCGAGTATGCTGATGCAGGGTTGAGGACTTTGATACTTGCCTATTGCGAGCTTGATGAGGAAGAATACAAGGAATTTGATGACAAGTTCACTATGGCCAAAAGCTCGGTTAGTGCAGATCGAGAATTGTTGATTGATAAAGTAACCGACAAAATCGAGAGGAATCTAATTCTTCTTGGTGCCACTGCTGTTGAGGACAAGCTTCAAAATGGGGTTCCTGAGTGCATCGACAGGCTTGCTCAGGCAGGAATTAAGATTTGGGTTTTGACCGGGGACAAAATGGAGACTGCCATAAATATTGGTTTCGCCTGTAGCTTACTAAGACAAGATATGAAGCAGATAGTCATTACGCTGGAGACATCAGAAATTCAGGCGCTAGAAAAGACAGGTGATAAGGCTTCCATCATCAAGGCCTCTATGCAATGCGTCCGCGATCAGATTACTCGAGGGAGAGCTCAGGTCACTTCATCAAGTGGGCTATCTGAAGCATTTGCATTAATTATTGATGGGAAATCACTTTCTTATGCTTTAGAGGACAGTATAAAGGCATTGTTTCTTGATCTAGCGATATATTGTGCTTCTGTTATTTGCTGCCGTTCATCTCCAAAACAGAAGGCACTGGTAACAAGGTTAGTTAAATCTGGAACACAGAAAACAACTTTAGCTATTGGTGATGGTGCCAATGATGTAGGAATGCTTCAAGAAGCGGATATTGGAGTTGGAATTAGCGGTGCTGAAGGAATGCAGGCCGTTATGTCGAGTGATGTTGCGATTGCGCAGTTTAAATATTTAGAGAACCTGCTTCTCGTGCATGGACATTGGTGCTACAGAAGGATATCCTCAATGATTTGCTACTTTTTCTACAAGAATATTACTTTTGGGTTTACCATATTCTTATATGAAGCATTCACATCATTCTCTGGGCAACCTGTATATAATGATTGGTTTTTATCACTTTACAATGTTTTCTTCTCGTCGCTTCCAGTGGTAGCTTTGGGAGTTTTTGATCAGGACGTATCTGCACGGCTCTGCCTCCAGGTATGCTCAGTTAATGTGCTTACATTCCGGTTTTTGAATAATTTCTTTGTCAGGCAGGGCAAACTACGAACTTTTTTGTTTTTATTTGGAACGTAA 3051 40.38 MSGGRRRKLHFSKIYSFACGKASLKDDHSQIGGPGFSRVVFCNEPDCFEAEIRNYVGNYVSTTKYTLATFLPKSLFEQFRRVANFYFLVSGILAFTPLAPYTAVSAILPLILVISATMIKEGIEDWRRKKQDIEVNNRKVKVHQGDGVFAYTEWMNLKVGNIVKVEKDEFFPADIILLSSSYEDAVCYVETMNLDGETNLKLKQALEVTSHMNEDSIFSSFKAIIKCEDPNANLYSFVGSMELEEQQYPLSPQQLLLRDSKLRNTDYIYGVVVFTGRDTKVIQNSTDPPSKRSKVERKMDKIIYFLFCLLFLLAFIGSIFFGLATGDDLENGRMKRWYLRPDDAKVFFDPKRAPLAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDINMYYEEANKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGRAYGRGFTEVERAMGRQRDSPLHKAVNGGNHREDVTNNTTHIKGFNFKDDRVMNGNWVNEPHANVIQMFFRLLATCHTAIPEINEESGEVSYEAESPDEAAFVIAARELGFEFYKRTQTSISLHEFDPSLGKKVDRTYKLLHVLEFNSSRKRMSVIVRNEEEKILLFCKGADSVMFERLGKKGREFEEETKEHVSEYADAGLRTLILAYCELDEEEYKEFDDKFTMAKSSVSADRELLIDKVTDKIERNLILLGATAVEDKLQNGVPECIDRLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIVITLETSEIQALEKTGDKASIIKASMQCVRDQITRGRAQVTSSSGLSEAFALIIDGKSLSYALEDSIKALFLDLAIYCASVICCRSSPKQKALVTRLVKSGTQKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDVAIAQFKYLENLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGQPVYNDWFLSLYNVFFSSLPVVALGVFDQDVSARLCLQVCSVNVLTFRFLNNFFVRQGKLRTFLFLFGT 1016
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8029779 8036470 + Tan0011394.1 Tan04g0924 749328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0924 1016 SFLD p-type atpase 408 913 IPR044492 -
Tan04g0924 1016 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Tan04g0924 1016 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Tan04g0924 1016 SUPERFAMILY HAD-like 412 905 IPR036412 -
Tan04g0924 1016 Gene3D - 694 902 IPR023214 -
Tan04g0924 1016 FunFam Phospholipid-transporting ATPase 540 698 - -
Tan04g0924 1016 CDD P-type_ATPase_APLT_Dnf-like 57 986 - -
Tan04g0924 1016 Gene3D - 544 673 IPR023299 GO:0000166(InterPro)
Tan04g0924 1016 Pfam Phospholipid-translocating ATPase N-terminal 40 106 IPR032631 -
Tan04g0924 1016 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 699 IPR023299 GO:0000166(InterPro)
Tan04g0924 1016 Pfam Cation transport ATPase (P-type) 520 624 - -
Tan04g0924 1016 SUPERFAMILY Calcium ATPase, transduction domain A 139 283 IPR008250 -
Tan04g0924 1016 FunFam Phospholipid-transporting ATPase 116 286 - -
Tan04g0924 1016 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 987 IPR032630 -
Tan04g0924 1016 NCBIfam phospholipid-translocating P-type ATPase 55 986 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan04g0924 1016 NCBIfam HAD-IC family P-type ATPase 833 944 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan04g0924 1016 SFLD Haloacid Dehalogenase 408 913 - -
Tan04g0924 1016 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Tan04g0924 1016 MobiDBLite consensus disorder prediction 463 482 - -
Tan04g0924 1016 Gene3D - 115 286 - -
Tan04g0924 1016 FunFam Phospholipid-transporting ATPase 698 902 - -
Tan04g0924 1016 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 985 IPR023298 -
Tan04g0924 1016 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 29 985 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0924 Tan-Chr4:8029779 Tan11g2053 Tan-Chr11:43586445 0.00E+00 dispersed
Tan04g0924 Tan-Chr4:8029779 Tan05g2303 Tan-Chr5:74511755 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0924 K01530 - csv:101207148 1791.93