Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0926 ATGGCGGCCGTATCACCGGCGCCTAATTCATCTCCATCGCCGGCTTCTCCTTCCACTCCATCTCCGCCGCCAAGTACTCCGTCACCGTCGCCGCCGCCGCAACAATCGCCTCCTCCGAATCCTTCTGGCCCCTCAACTCCTACTTCGCCTCCACCTGCTTCTGGAACTCCGCCGCCATTAACACCCGCATTGTCTCCTCCGCCGCCTCGGACTGTTCCGCCGACAACTCCGCCACCAACTCCGTCCAGTGCTCCGCCCCCATCAACACCAGACCCTCCACCACCATCAGCAACCCCACCAGTAAGCTCCACTCCACCGCCATCTAATCCCCCAACAAATTCACCTCCACCTCGAGCAGCAGAGCCTCCTCAAACCCCTCCTCCACAACCATCAAACCCACCTCAAAACTCACCGCCGCCGCCACCACCTCAAGCAAACCCCCCGAAAAATCCATCGCCTCCGCCACAGCCCACGGACCCACCTGAGAATCCACCCCCCACACCACCATCTTCACCTCCAGAAACTTCACCTCCACCCCCAGCGTCAATACCTCCTAGAAATTCACCTCCACCTCAAAGGCTCTCTCCTCCTCCCAGTGACCCTCCACCTTCAAGTCCTCCTCCCAAGCCATTGCCGCCTCCATCAATTTTGCCACCTCCACCGTCACTTGTTTCTCCTCCAGCACCGTCAGGAAATCGCACAGACGATGGTTCTGGTCCTAATGGTGGAGAAAACTCGAATTCCAACAGCAATGGAGGAATTAGTAATGGGGGTGTGATTGCAATTGGTGTAGTGACTGGAATTGTAGTACTTTCCATAGTTGGATTTTTTGTATGGTACATCAGGAAGCCAAGGAGAAATGATTCTGGGCGTGGGGGTTACATTATGCCATCCTCTATGGGCTCCTCACCTAAGTCAGAATCATCCCTTATGAAGGTCCATTCCACACTTCACCAAGACAGACATGCCACTGGCAGTGGCAGTGCCAGTGGTGGAACATACTCCCCAAAAGAGCTTGGTGGGTTGGGAAATTCAAGGTCAATGTTTACATATGAAGAACTCTTCAAAGCAACAAATGCATTTTCTGCTCAGAATCTTTTGGGAGAAGGTGGATTTGGTTCTGTTTATAAAGGATATCTGCCAGATGGAAGAGAGGTTGCAGTGAAGGAGCTAAAGATTGGTGGTGGTCAGGGTGAGCAGGAATTCAAAGCTGAAGTCGAGATTATTGGTCGCGTACACCACCGCCATTTGGTTTCTCTCGTGGGCTACTGCATTTCAGAGCATCAAAGGTTGCTGGTCTATGATTATGTCCCTAACAATTCCGTTTACTACCATCTTCATGTTAAAGGGGACAGCCAGCTTGTTCTGGACTGGGAAAAACGCATTAAGATAGCAGCTGGTGCAGCCCGGGGAATAGCTTATCTTCACGAAGACTGCCACCCTCGAATTATCCACCGAGATATCAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCAGACTTTGGGCTAGCTAAATTAGCTCTTGACGCACAAACTCATATAACCACTCGTGTTGTGGGAACTTTTGGATATGTTGCCCCTGAATATGCATCGAGTGGAAAGTTAACTGAGAGATCAGATGTATATTCTTTTGGAGTTGTACTTCTCGAGCTGATTACTGGTCGGAAGGCTGTCGACGCATCCCAACCAATGGGGGATGAGAGCCTTGTCGAATGGGCTCGGCCCTTACTAAACCATGCGCTCGACAACCAAGATTTCGAAAGATTGGTAGACCCGAGGCTTGGAAGGAACTATGTTGAGAGTGAAATGTTGAAGATGATAGGAATAGCTGCTGCTTGCGTTCGGCATGCGTCTGCAAAGAGACCGCAGATGGGACAGGTTGTTCGAGCTTTCGATAGTTTAGCAACTACAGATTTAAGTAATGGAATGAGATTCGGGGAGAGTCAAGCTTTCGACTCCGGTCAAAAATCCGCGGAGATTAGATTTTTCCGAATGCTGGCATTTGGTAACCAAGATTACAGTTCAGACTTTTATAGCCAAGGTAGCTCAAATGCCTGA 2073 50.17 MAAVSPAPNSSPSPASPSTPSPPPSTPSPSPPPQQSPPPNPSGPSTPTSPPPASGTPPPLTPALSPPPPRTVPPTTPPPTPSSAPPPSTPDPPPPSATPPVSSTPPPSNPPTNSPPPRAAEPPQTPPPQPSNPPQNSPPPPPPQANPPKNPSPPPQPTDPPENPPPTPPSSPPETSPPPPASIPPRNSPPPQRLSPPPSDPPPSSPPPKPLPPPSILPPPPSLVSPPAPSGNRTDDGSGPNGGENSNSNSNGGISNGGVIAIGVVTGIVVLSIVGFFVWYIRKPRRNDSGRGGYIMPSSMGSSPKSESSLMKVHSTLHQDRHATGSGSASGGTYSPKELGGLGNSRSMFTYEELFKATNAFSAQNLLGEGGFGSVYKGYLPDGREVAVKELKIGGGQGEQEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVPNNSVYYHLHVKGDSQLVLDWEKRIKIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDAQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVVLLELITGRKAVDASQPMGDESLVEWARPLLNHALDNQDFERLVDPRLGRNYVESEMLKMIGIAAACVRHASAKRPQMGQVVRAFDSLATTDLSNGMRFGESQAFDSGQKSAEIRFFRMLAFGNQDYSSDFYSQGSSNA 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8051596 8056444 - Tan0021753.1 Tan04g0926 749330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0926 690 MobiDBLite consensus disorder prediction 228 252 - -
Tan04g0926 690 MobiDBLite consensus disorder prediction 1 252 - -
Tan04g0926 690 ProSiteProfiles Protein kinase domain profile. 361 639 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0926 690 CDD STKc_IRAK 367 639 - -
Tan04g0926 690 MobiDBLite consensus disorder prediction 299 313 - -
Tan04g0926 690 FunFam proline-rich receptor-like protein kinase PERK8 437 650 - -
Tan04g0926 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g0926 690 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 238 665 IPR047117 -
Tan04g0926 690 FunFam Proline-rich receptor-like protein kinase PERK8 333 436 - -
Tan04g0926 690 SUPERFAMILY Protein kinase-like (PK-like) 344 634 IPR011009 -
Tan04g0926 690 SMART serkin_6 361 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0926 690 Gene3D Transferase(Phosphotransferase) domain 1 437 653 - -
Tan04g0926 690 MobiDBLite consensus disorder prediction 289 337 - -
Tan04g0926 690 Pfam Protein kinase domain 363 571 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0926 690 Gene3D Phosphorylase Kinase; domain 1 334 436 - -
Tan04g0926 690 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524(InterPro)
Tan04g0926 690 MobiDBLite consensus disorder prediction 10 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0926 Tan-Chr4:8051596 Tan11g0375 Tan-Chr11:3035853 9.70E-145 dispersed
Tan04g1751 Tan-Chr4:46525028 Tan04g0926 Tan-Chr4:8051596 1.50E-69 dispersed
Tan04g1843 Tan-Chr4:57366087 Tan04g0926 Tan-Chr4:8051596 3.80E-61 dispersed
Tan05g1315 Tan-Chr5:16328716 Tan04g0926 Tan-Chr4:8051596 1.60E-38 dispersed
Tan09g2084 Tan-Chr9:71204803 Tan04g0926 Tan-Chr4:8051596 3.30E-62 dispersed
Tan11g1235 Tan-Chr11:10471838 Tan04g0926 Tan-Chr4:8051596 2.10E-67 dispersed
Tan11g1538 Tan-Chr11:14172463 Tan04g0926 Tan-Chr4:8051596 1.50E-59 dispersed
Tan11g1725 Tan-Chr11:17238035 Tan04g0926 Tan-Chr4:8051596 5.00E-67 dispersed
Tan04g0926 Tan-Chr4:8051596 Tan04g0932 Tan-Chr4:8204132 1.60E-69 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67441 PF00069 Pkinase 1.20E-43 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0926 - - - 0.0