Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0935 ATGGCAATATTATCAATCTCCAATCCCTCTTCATTAAGCCTGGTTTATGGAGTGATAATGGTGGTTTGTGTTTTATTTGCTGTGAGCAACAGCTTGTATGAGGCCCGATTGAGGTTGGATTACTATGCCAAAACTTGTCCCAATGTGTTGCAGGTTGTGAGGAAAGAGATGGAGTGTGCAGTGCTTTCTGACCCACGTATTGCACCTTTTGTTCTTCGCTTGCACTTCCATGACTGCTTTGTCCAGGGATGCGATGGGTCAATTCTGCTGGACGACACAATAACACTACAAGGAGAGAAAAAGGCTTCCACCAACATACATTCCCTCAAAGGCTTCAGAATCATCGACAGGATAAAGAACAGCCTTGAATCAGAATGCCCTGGCATCGTTTCTTGTGCAGATATACTCACTATTGCAGCCAGGGATGCTGTCATTCTGGTGGGCGGTCCTTACTGGGAGGTTCCTCTTGGAAGAATGGATTCCACAACTGCAAGTTATGAACTTGCAAACACAAATCTTCCCTCTGCCAATGAGGGGCTTCTGAGCATCATCTCCAAGTTTCTTTATCAGGGTCTCTCTGTCACTGATATGGTAGCTCTATCAGGAGCGCACACGATCGGGATGGCGAGGTGCGAGAATTTCAGGGAAAGGATTTATGGGGATTTTGAAGCAACTTCAGATGCAAACAACCCAATTTCAAAGTCATATCTTGAGAAGTTGAGGTCTATTTGTCCTCCAATTGAAAAAGCTGCAGAAAACAATGTAACAGCAATGGACAATGTGACACCAGAGGTTTTTGATAATTCCTATTTCCACATCTTGATAAGAGGAGAAGGGCTTATGAATTCAGACCAGGAATTGTATTCCAGTCTTTTGGGCATGGAAACCAGGGCATTGGTGAAGAAATATGCTGCTGATCCACTTGCTTTCTTTCAACAATTCTCTGATTCCATGGTGATTTTGGGAAATATTACCAATTCTGAAACCTTTCTCACTGGGGAAGTTAGAAAAAACTGCAGGTTTATCAACACATGA 1035 43.29 MAILSISNPSSLSLVYGVIMVVCVLFAVSNSLYEARLRLDYYAKTCPNVLQVVRKEMECAVLSDPRIAPFVLRLHFHDCFVQGCDGSILLDDTITLQGEKKASTNIHSLKGFRIIDRIKNSLESECPGIVSCADILTIAARDAVILVGGPYWEVPLGRMDSTTASYELANTNLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRERIYGDFEATSDANNPISKSYLEKLRSICPPIEKAAENNVTAMDNVTPEVFDNSYFHILIRGEGLMNSDQELYSSLLGMETRALVKKYAADPLAFFQQFSDSMVILGNITNSETFLTGEVRKNCRFINT 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8233270 8237820 - Tan0016082.1 Tan04g0935 749339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0935 344 SUPERFAMILY Heme-dependent peroxidases 37 343 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 Gene3D Peroxidase, domain 2 174 321 - -
Tan04g0935 344 CDD secretory_peroxidase 37 342 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan04g0935 344 FunFam Peroxidase 40 181 - -
Tan04g0935 344 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601(InterPro)
Tan04g0935 344 FunFam Peroxidase 174 321 - -
Tan04g0935 344 PANTHER PEROXIDASE 72-RELATED 20 342 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 Pfam Peroxidase 53 306 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 ProSiteProfiles Plant heme peroxidase family profile. 36 343 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g0935 344 Gene3D - 40 343 - -
Tan04g0935 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0935 Tan-Chr4:8233270 Tan07g1935 Tan-Chr7:71119881 2.50E-77 dispersed
Tan04g0935 Tan-Chr4:8233270 Tan03g2030 Tan-Chr3:75315168 3.30E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0935 K00430 - csv:101216779 572.392