Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g0943 | ATGGATATTGGTGACAGAGATAAGTTTAGACTGGAAAGTAGCTCAGAGGATTGTATTAACTATTCACATAGCATGTCTTCGGATTGGCGATTTGGCGAGACGGTGTTCACGAGTATGCCGATTGGATTGGTTTTGCCAGGAAATGTGGATGTAGTTAGGAATCAGGATATGGTTGGTTGTTCTTCTTCTACTGCTCCTGTGGTAGAGGGATTTAGCTCTACTATCTGGGAACAAGCAGCTAATTGTCAAAACTTGGGAATTTGCAGCATTCAAGACCATAACAATTGTAGTACTTCAAACACCATAGCAAATAACAAGGCCAGTGCCTGTCCAGTGTCTTTGAGCAGTGACATTGACAGAACACTTGACATCAGCTGGAACCTATCACATACTATCAACAAAGGGGGAGTTTACCTGCCTAATATTCCTGGTGTGCTCCCACCGAGCTTATCTCAACTTCCAGCTGATTCTTCATTTATTGAGCGTGCAGCCAGGCTCTCCTGCTTTAGTGGTGGTAATTTTAGTGATATTGTTGGCCATTTCAACATTCCTGAGCCTATGGGTGTTTTTCCTAGAGGCATGGGAGTAATACCTGAGAGACAGGATGATATTCCTCGAAATGGGTTAGGTTTGGTATCGGGAACCGGAGGACAATCCCAAAGGAACACGGTTAGCAGTGAAGCTTCCAAGCCTGTTTCTTTGACTAATGAACATGGAGCTACTGAAGGGGGTTCACCTAAAAATGGAAGCCCTTTGAAATTGGATGATCGTGGTAAACATGCGGTTGATGGTTTGGCTAATGAATCCGATGAAGCTGAGTTTAGCGGTGGTGATGGTTCGGGTGAGCCATGTACGTTAGAGGTTGCAGGTAAGGAACTTTCTGCTAAGGGACTAGGTGCAAGGAAAAGGAAAAGGAGTGGACAGAAGACTGAACTTGATCAAGCCAATGGACCTCTGCAACAAACTAGTGTTTCGGCTAAGGATAATACTGAAACTCAGCAAAAGGGAGATCAAAATCCGAGTTCAACCGCAAACAAGAGTACAGGAAAACATGGTAAACAGGCGTCTCAACCTTTAGATCCACCAAAGGAAGAGTATATTCATGTTAGAGCTCGAAGGGGCCAAGCGACAAACAGCCATAGTCTTGCAGAAAGGGTAAGGAGGGAGAAGATCAGCGAGAGGATGAAATTTCTTCAAGAACTAGTCCCTGGTTGCAGCAAGGTTACTGGGAAAGCAGTGATGCTAGATGAAATTATTAACTATGTCCAATCACTGCAACGACAAGTTGAGTTTTTATCGATGAAACTCGCTACTGTCAATCCAAGGTTGGATGTTAACATTGATGGGCTCCTAGCCAAAGATATTCTTCAATCACGAGCTGGTCCATCGTCGACATTGGGATTTTCCTCACATATGCCCGTTGCTTGTCCGCCACCACATATTGCTCATCATGGACTTATCCCAGGCAGTTTTCCTGCCATAGGGTGCTCTGAGATGTTAAGAAACACAATAAGCTCTCAGATAACTCCAAGGTCTGGTGCATTTAAGGAGCCTACTCAGATAAAGAATGTATGGGATGGTGAACTCCAAAACATTGTGCAGATGAGCTTTGGGATGTCCACTACCCCTAATTCTTTAGAAGTTGAAGGGTCTGATTCACCAGGCAATACAAAAGTTGAACATTGA | 1686 | 44.07 | MDIGDRDKFRLESSSEDCINYSHSMSSDWRFGETVFTSMPIGLVLPGNVDVVRNQDMVGCSSSTAPVVEGFSSTIWEQAANCQNLGICSIQDHNNCSTSNTIANNKASACPVSLSSDIDRTLDISWNLSHTINKGGVYLPNIPGVLPPSLSQLPADSSFIERAARLSCFSGGNFSDIVGHFNIPEPMGVFPRGMGVIPERQDDIPRNGLGLVSGTGGQSQRNTVSSEASKPVSLTNEHGATEGGSPKNGSPLKLDDRGKHAVDGLANESDEAEFSGGDGSGEPCTLEVAGKELSAKGLGARKRKRSGQKTELDQANGPLQQTSVSAKDNTETQQKGDQNPSSTANKSTGKHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDVNIDGLLAKDILQSRAGPSSTLGFSSHMPVACPPPHIAHHGLIPGSFPAIGCSEMLRNTISSQITPRSGAFKEPTQIKNVWDGELQNIVQMSFGMSTTPNSLEVEGSDSPGNTKVEH | 561 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 8332786 | 8337450 | + | Tan0007596.3 | Tan04g0943 | 749347 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g0943 | 561 | MobiDBLite | consensus disorder prediction | 295 | 362 | - | - | |
Tan04g0943 | 561 | MobiDBLite | consensus disorder prediction | 212 | 243 | - | - | |
Tan04g0943 | 561 | MobiDBLite | consensus disorder prediction | 541 | 561 | - | - | |
Tan04g0943 | 561 | MobiDBLite | consensus disorder prediction | 296 | 310 | - | - | |
Tan04g0943 | 561 | MobiDBLite | consensus disorder prediction | 311 | 354 | - | - | |
Tan04g0943 | 561 | Pfam | Helix-loop-helix DNA-binding domain | 378 | 426 | IPR011598 | GO:0046983(InterPro) | |
Tan04g0943 | 561 | CDD | bHLH_AtBPE_like | 365 | 450 | - | - | |
Tan04g0943 | 561 | Gene3D | - | 372 | 446 | IPR036638 | GO:0046983(InterPro) | |
Tan04g0943 | 561 | FunFam | Basic helix-loop-helix transcription factor | 372 | 444 | - | - | |
Tan04g0943 | 561 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 373 | 443 | IPR036638 | GO:0046983(InterPro) | |
Tan04g0943 | 561 | SMART | finulus | 381 | 431 | IPR011598 | GO:0046983(InterPro) | |
Tan04g0943 | 561 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 150 | 496 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Tan04g0943 | 561 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 375 | 425 | IPR011598 | GO:0046983(InterPro) | |
Tan04g0943 | 561 | MobiDBLite | consensus disorder prediction | 198 | 258 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0941 | Tan-Chr4:8332786 | Tan04g0943 | Tan-Chr4:8332786 | 0.00E+00 | dispersed | |
Tan04g0943 | Tan-Chr4:8332786 | Tan04g0945 | Tan-Chr4:8332786 | 6.80E-298 | dispersed | |
Tan04g0942 | Tan-Chr4:8332786 | Tan04g0943 | Tan-Chr4:8332786 | 6.40E-298 | tandem | |
Tan04g0943 | Tan-Chr4:8332786 | Tan04g0944 | Tan-Chr4:8332786 | 6.80E-298 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27209 | PF00010 | HLH | 6.30E-06 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g0943 | - | - | - | 0.0 |