Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g0944 | ATGGATATTGGTGACAGAGATAAGTTTAGACTGGAAAGTAGCTCAGAGGATTGTATTAACTATTCACATAGCATGTCTTCGGATTGGCGATTTGGCGAGACGGTGTTCACGAGTATGCCGATTGGATTGGTTTTGCCAGGAAATGTGGATGTAGTTAGGAATCAGGATATGGTTGGTTGTTCTTCTTCTACTGCTCCTGTGGTAGAGGGATTTAGCTCTACTATCTGGGAACAAGCAGCTAATTGTCAAAACTTGGGAATTTGCAGCATTCAAGACCATAACAATTGTAGTACTTCAAACACCATAGCAAATAACAAGGCCAGTGCCTGTCCAGTGTCTTTGAGCAGTGACATTGACAGAACACTTGACATCAGCTGGAACCTATCACATACTATCAACAAAGGGGGAGTTTACCTGCCTAATATTCCTGGTGTGCTCCCACCGAGCTTATCTCAACTTCCAGCTGATTCTTCATTTATTGAGCGTGCAGCCAGGCTCTCCTGCTTTAGTGGTGGTAATTTTAGTGATATTGTTGGCCATTTCAACATTCCTGAGCCTATGGGTGTTTTTCCTAGAGGCATGGGAGTAATACCTGAGAGACAGGATGATATTCCTCGAAATGGGTTAGGTTTGGTATCGGGAACCGGAGGACAATCCCAAAGGAACACGGTTAGCAGTGAAGCTTCCAAGCCTGTTTCTTTGACTAATGAACATGGAGCTACTGAAGGGGGTTCACCTAAAAATGGAAGCCCTTTGAAATTGGATGATCGTGGTAAACATGCGGTTGATGGTTTGGCTAATGAATCCGATGAAGCTGAGTTTAGCGGTGGTGATGGTTCGGGTGAGCCATGTACGTTAGAGGTTGCAGGTAAGGAACTTTCTGCTAAGGGACTAGGTGCAAGGAAAAGGAAAAGGAGTGGACAGAAGACTGAACTTGATCAAGCCAATGGACCTCTGCAACAAACTAGTGTTTCGGCTAAGGATAATACTGAAACTCAGCAAAAGGGAGATCAAAATCCGAGTTCAACCGCAAACAAGAGTACAGGAAAACATGGTAAACAGGCGTCTCAACCTTTAGATCCACCAAAGGAAGAGTATATTCATGTTAGAGCTCGAAGGGGCCAAGCGACAAACAGCCATAGTCTTGCAGAAAGGGTAAGGAGGGAGAAGATCAGCGAGAGGATGAAATTTCTTCAAGAACTAGTCCCTGGTTGCAGCAAGGTTACTGGGAAAGCAGTGATGCTAGATGAAATTATTAACTATGTCCAATCACTGCAACGACAAGTTGAGTTTTTATCGATGAAACTCGCTACTGTCAATCCAAGGTTGGATGTTAACATTGATGGGCTCCTAGCCAAAGATATTCTTCAATCACGAGCTGGTCCATCGTCGACATTGGGATTTTCCTCACATATGCCCGTTGCTTGTCCGCCACCACATATTGCTCATCATGGACTTATCCCAGGCAGTTTTCCTGCCATAGGGTGCTCTGAGATGTTAAGAAACACAATAAGCTCTCAGATAACTCCAAGGTCTGGTGCATTTAAGGAGCCTACTCAGGTAGCAACTTAA | 1572 | 44.34 | MDIGDRDKFRLESSSEDCINYSHSMSSDWRFGETVFTSMPIGLVLPGNVDVVRNQDMVGCSSSTAPVVEGFSSTIWEQAANCQNLGICSIQDHNNCSTSNTIANNKASACPVSLSSDIDRTLDISWNLSHTINKGGVYLPNIPGVLPPSLSQLPADSSFIERAARLSCFSGGNFSDIVGHFNIPEPMGVFPRGMGVIPERQDDIPRNGLGLVSGTGGQSQRNTVSSEASKPVSLTNEHGATEGGSPKNGSPLKLDDRGKHAVDGLANESDEAEFSGGDGSGEPCTLEVAGKELSAKGLGARKRKRSGQKTELDQANGPLQQTSVSAKDNTETQQKGDQNPSSTANKSTGKHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDVNIDGLLAKDILQSRAGPSSTLGFSSHMPVACPPPHIAHHGLIPGSFPAIGCSEMLRNTISSQITPRSGAFKEPTQVAT | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 8332786 | 8337450 | + | Tan0007596.4 | Tan04g0944 | 749348 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g0944 | 523 | MobiDBLite | consensus disorder prediction | 295 | 362 | - | - | |
Tan04g0944 | 523 | MobiDBLite | consensus disorder prediction | 212 | 243 | - | - | |
Tan04g0944 | 523 | MobiDBLite | consensus disorder prediction | 296 | 310 | - | - | |
Tan04g0944 | 523 | MobiDBLite | consensus disorder prediction | 311 | 354 | - | - | |
Tan04g0944 | 523 | Gene3D | - | 372 | 446 | IPR036638 | GO:0046983(InterPro) | |
Tan04g0944 | 523 | CDD | bHLH_AtBPE_like | 365 | 450 | - | - | |
Tan04g0944 | 523 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 150 | 469 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Tan04g0944 | 523 | SMART | finulus | 381 | 431 | IPR011598 | GO:0046983(InterPro) | |
Tan04g0944 | 523 | FunFam | Basic helix-loop-helix transcription factor | 372 | 444 | - | - | |
Tan04g0944 | 523 | Pfam | Helix-loop-helix DNA-binding domain | 378 | 426 | IPR011598 | GO:0046983(InterPro) | |
Tan04g0944 | 523 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 373 | 443 | IPR036638 | GO:0046983(InterPro) | |
Tan04g0944 | 523 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 375 | 425 | IPR011598 | GO:0046983(InterPro) | |
Tan04g0944 | 523 | MobiDBLite | consensus disorder prediction | 198 | 258 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0942 | Tan-Chr4:8332786 | Tan04g0944 | Tan-Chr4:8332786 | 5.80E-299 | dispersed | |
Tan04g0944 | Tan-Chr4:8332786 | Tan11g1640 | Tan-Chr11:15877923 | 3.00E-106 | dispersed | |
Tan04g0943 | Tan-Chr4:8332786 | Tan04g0944 | Tan-Chr4:8332786 | 6.80E-298 | tandem | |
Tan04g0944 | Tan-Chr4:8332786 | Tan04g0945 | Tan-Chr4:8332786 | 5.80E-299 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27210 | PF00010 | HLH | 5.70E-06 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g0944 | - | - | - | 0.0 |