Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0961 ATGGCTCTTAAATCTCTGCTAAAACCCAAATCCTCCATTAGAAAATTCTTCCATTTTTCCTCTCTATCGTCTTCTTCGCCATTCTCCTCCCTCTGCAAAGAACGTATTTTCTCACTGCCTTCCGAATCCCCACAAGCTGCTAAAAAAGTTCCTTTCACTCACTCAGTTCATGGCGTTACGCTGGAAGATCCCTACCATTGGATGTCCAACACCGACGATCCTGATCTCGCCGACCACCTCCGTCGAGAAAACTTGTACGCTGAAGCTTTCATGGCCGACACTCAGATTCTGCAGCGGCAGCTCTTCTCCGAGATGACGAGTCGAATCCCTGCCAGGGTTTCTACTCCTCCTGAGCCGTGGGGACACTGGTTTTACTACCAATACATTCCGGAAGGGAAGGAATACCCAGTTCTATGTCGTAGGTTGCAGAGTGAGAAAAGCGGTTGGTTCAAGAAACTTGTACGATTTGCCAAAGGAAATTTTGGGAGGGAGGAGGAAGTTTTGCTTGATTGGAATGACATTGCTAAACAATATGGCTATGTTCACGTGGGAACTTGTCGTGTTTCACCAGACCACAACTTTCTAGCATATACAGTTGATATTACTGGCAGTGAACACTTCATGCTTCAGGTTAAAGACCTGAGAACTGGACTGATAATTCCCAAGTTACAGGAGGGAGTTGTGAGTTTGGCCTGGGCAGAAGAAGGCAGGATGCTTTTCTATACACAAGCAGATGAGAATCAGCGACCTTACAGGGTTTTCTGCACAAAAGTTGGATGTAGGGATACAGAAGATATCCTGGTGTTTGTTGAAAATGATCCCAACTATTGTGTGGACATAACAAGCACAAAAGATGGGAAATTCATAACTGTTTATATTATAGATTCTAACAACTCGTTAAGTGGTTTGCAAAGAATACACAAACGCATTCCTGGTATTCAATACTTTCTGGAACATCATCGTGGTTTCTTTTATATCCTAACAAATGCTCCTCTAGAAAAGAATGGGGATTGTTCCAAGGAAGAGTATTATGTAGCTCGATGTCGAGTTGAAGATATTAAGTTAGCAGATTGGCAGGATATCATCCTTCATAGTGAAGATTTCAGTGTACAGGATATGGACATTTTTAGTGGACATCTTGTGCTTTTTGTCAATAATAAGGGTGTTCCGATGTTATGTTCGATCAATTTGCCTTTAGATGCTAAACATAAGCAACGATTGGAGATTAAGACACTTGACCCGTGGTTTTTCCCTGTTCCCGCAAATTCCTGCAGTGTATCTCCAGGCTCAAACCATGACTTCATGAGCTCAGTATATCGTGTGGTGCTTTCATCTCCAGTGATGCCAGATTTGATTGTTGACTATGACATGTCTAAACGGGTCTTCTCAATCATTCAGCAAGAGGAAGTACAAGTTAAGAATGATGTTAAACTTGAAACGCATGTGTCGAATGAGTTGGATATAGAAGAAGATTCGGATTCACAAAACAAAAGAGAGAACTTGCAGAATAAGAATAGTGAATCCCAAATTTGGAAGGACTTTTCTGATGCATACTGTTGTGAGAGGAAGGAAGTTATATCACATGATGGCACGAGAATACCGTTGACCATATTGTATTCTCCAATGACCTTTCAGAAAGGACAGTCACCCGGAGTTCTACAAGGGTATGGAGCATATGGCGAAATCCTGGATAAAAGTTGGTGTCCTTATCGCCTGAGTTTACTTGATCGTGGTTTTGTGCTGGCATTTGCAGACGTCAGGGGAGGAGGTGGTGTTGGTGATTCTTTATGGCATAGATGTGGGAGTGGGCTTGAGAAAAAAAATTCAATACATGACTTCATCTCTTGTGCGAATTTCCTCGTTGATAATGGATATGTTAGTAAGAATCGGCTTGGTTCCATTGGATACAGTGCAGGAGGTCTTCTTGTTGGGGCTGCTATCAACAAGCATCCCAGCCTGTTTCGAGCAGCCATTTTGAAGGTTCCATTTCTTGACATATGCAACACGCTACTAGATCCAACTTTACCTCTCACCATTCTGGATTATGAAGAATTTGGAAACCCACAGATAGCCCTGCAGTTCAAGTCCATTTCGAGCTATTCTCCTTACGATAACATATCTCGAGGAAGTTGTTATCCTTCTATGCTCGTCACCGCATCATTCCGTGATGCAAGGGTTGGAGTATGGGAAGCTGCCAAATGGGTGGCAAAAATACGAGACACTACATGCTCTCATTGTTCAACTTCTGCAATTTTAAAGACCAATATGCTTGGAGGACATTTTGGTGAAGGTGGTCTCTATGGTGGATGTGAAGAGACAGCTTACGAGTACGCTTTTCTGATCAAAGTCCTCGGAACTTCCAACTGCGATTAA 2373 42.69 MALKSLLKPKSSIRKFFHFSSLSSSSPFSSLCKERIFSLPSESPQAAKKVPFTHSVHGVTLEDPYHWMSNTDDPDLADHLRRENLYAEAFMADTQILQRQLFSEMTSRIPARVSTPPEPWGHWFYYQYIPEGKEYPVLCRRLQSEKSGWFKKLVRFAKGNFGREEEVLLDWNDIAKQYGYVHVGTCRVSPDHNFLAYTVDITGSEHFMLQVKDLRTGLIIPKLQEGVVSLAWAEEGRMLFYTQADENQRPYRVFCTKVGCRDTEDILVFVENDPNYCVDITSTKDGKFITVYIIDSNNSLSGLQRIHKRIPGIQYFLEHHRGFFYILTNAPLEKNGDCSKEEYYVARCRVEDIKLADWQDIILHSEDFSVQDMDIFSGHLVLFVNNKGVPMLCSINLPLDAKHKQRLEIKTLDPWFFPVPANSCSVSPGSNHDFMSSVYRVVLSSPVMPDLIVDYDMSKRVFSIIQQEEVQVKNDVKLETHVSNELDIEEDSDSQNKRENLQNKNSESQIWKDFSDAYCCERKEVISHDGTRIPLTILYSPMTFQKGQSPGVLQGYGAYGEILDKSWCPYRLSLLDRGFVLAFADVRGGGGVGDSLWHRCGSGLEKKNSIHDFISCANFLVDNGYVSKNRLGSIGYSAGGLLVGAAINKHPSLFRAAILKVPFLDICNTLLDPTLPLTILDYEEFGNPQIALQFKSISSYSPYDNISRGSCYPSMLVTASFRDARVGVWEAAKWVAKIRDTTCSHCSTSAILKTNMLGGHFGEGGLYGGCEETAYEYAFLIKVLGTSNCD 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8460571 8465030 - Tan0017767.1 Tan04g0961 749365

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0961 790 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 39 785 IPR051543 GO:0009507(PANTHER)
Tan04g0961 790 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 44 464 IPR023302 GO:0004252(InterPro)
Tan04g0961 790 SUPERFAMILY Peptidase/esterase 'gauge' domain 43 471 - -
Tan04g0961 790 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 605 624 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g0961 790 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 712 734 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g0961 790 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 576 600 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g0961 790 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 635 655 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g0961 790 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 693 708 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g0961 790 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 550 568 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g0961 790 MobiDBLite consensus disorder prediction 484 505 - -
Tan04g0961 790 MobiDBLite consensus disorder prediction 484 500 - -
Tan04g0961 790 Pfam Prolyl oligopeptidase family 571 786 IPR001375 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan04g0961 790 Gene3D - 112 469 - -
Tan04g0961 790 Gene3D alpha/beta hydrolase 63 782 IPR029058 -
Tan04g0961 790 SUPERFAMILY alpha/beta-Hydrolases 520 741 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0961 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0441 Tan-Chr4:3687112 Tan04g0961 Tan-Chr4:8460571 1.20E-92 dispersed
Tan04g0961 Tan-Chr4:8460571 Tan08g0376 Tan-Chr8:3395653 7.20E-152 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g945 . . . . Bpe13g01395 . . . Cmo04g01650 . . . Car04g01628 . Sed08g1575 . Cpe01g01400 Bhi07g01449 Tan04g0961 Cmetu10g1342 Lac13g0407 Hepe10g1818 . . . . . . . . . Cone13ag0930 Cone19ag0923 Cone6ag0559 Cone9ag0566 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007009 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 3 1 1 37