Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g0973 | ATGGGGAAAACCGGGGCGAAGTTACCGAGTTTCTGCCTGAACCGGATCCGGCCTCACGTTCGAGTGCCTATTCAGTCCAAACCGGACTCTGTTTCAGTGAAAACCGGGCAGAAGAAGGGTGATGATTTTGAAGAGAAGAATTTTGATGACAATAATGTTGGAGCTAAGTCAGGGTTGGGAATTGGAAGGAAGATCATGATTGTGATTGATTCCACCTTTGAAGCTGAAGGAGCTCTTCAATGGGCGCTTTCTCATACAGTTCAGAATCAAGACATGATTGTTCTTCTCCATGTCACTAAGCCTTCAAAAAAAGGGGAAGGATCCAGCAAGGAGACAGCTCCAAGAACATTTGAAGTGGTTCACTCCATGAGAAATTTATGTCAATTAAAGAGACCTGAGGTGGAAATTGAAGTAGCAGTGGTGGAAGGGAAAGAGAAAGGGCCAGTGATAGTGGAAGAAGCGAGAAAGCAAAGGGCATCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCCACGACATGGCGGCTTCTGATGGTGTGGGCCGGCCACCGGTTAGGCGGTGGTGGTGGCGGCGCGGTGGAGTATTGTATTCAGAATGCGAGCTGCATGGCGATTGCAGTGAGAAGGAAGAGCAAGAAATTAGGTGGTTATTTGATCACAACAAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA | 693 | 47.47 | MGKTGAKLPSFCLNRIRPHVRVPIQSKPDSVSVKTGQKKGDDFEEKNFDDNNVGAKSGLGIGRKIMIVIDSTFEAEGALQWALSHTVQNQDMIVLLHVTKPSKKGEGSSKETAPRTFEVVHSMRNLCQLKRPEVEIEVAVVEGKEKGPVIVEEARKQRASLLVLGQKKRSTTWRLLMVWAGHRLGGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA | 230 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 8804105 | 8806939 | - | Tan0003687.1 | Tan04g0973 | 749377 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g0973 | 230 | Pfam | Universal stress protein family | 63 | 207 | IPR006016 | - | |
| Tan04g0973 | 230 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 63 | 210 | - | - | |
| Tan04g0973 | 230 | Gene3D | HUPs | 62 | 214 | IPR014729 | - | |
| Tan04g0973 | 230 | CDD | USP_Like | 64 | 206 | - | - | |
| Tan04g0973 | 230 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 230 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4008 | Tan-Chr1:104984509 | Tan04g0973 | Tan-Chr4:8804105 | 5.70E-22 | transposed | |
| Tan11g1284 | Tan-Chr11:10963953 | Tan04g0973 | Tan-Chr4:8804105 | 7.30E-25 | transposed | |
| Tan04g0973 | Tan-Chr4:8804105 | Tan05g2333 | Tan-Chr5:74762551 | 2.40E-47 | wgd | |
| Tan04g0973 | Tan-Chr4:8804105 | Tan09g2012 | Tan-Chr9:70792307 | 2.10E-51 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g0973 | - | - | - | 0.0 |