Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0982 ATGAGTGGTAACCGGATTGCTCATACTTTGCTACACCGAGCTCGAAGGGCCGCCGCTTTCTCTTCATTTTCCTCCGCCGGAAGACCGTCTTCTTTAGTCTTTTCCGCCGAAGCAAGGTCTTCTCAAAGTTCTTGCTCCTTTTCCTCCCGTCATCTTCATTTCCGTCGCCAGCACGCATTCGCCTTTTCTCCCTCAGCAACCATACGCTTATTCAATACCAATTCCTCTAAAGAATTTGAAGATGAAGTGAAAGAACAGAATCCACTTCAATCCGGGAGGGATGAAGGGGAAGAAACTACGGATGGATGGGAAGAAGACGATGATCTGGAGCCTGAGCTTGGTGATGGAGGGGGTGGTGGTGGTGTTGTTTTGCAAGGCGTGCCATGGGGCGAACGTGTTCTTTCTCTTGCTCATGAGATCCTGCTGCAATTCGGCGATGACATAAAACTTTATTCTTTTAAGACTACTCCACGTGGATATATTTATGTCAGATTAGACAAGCTCTCAAACGAATATGGGTGTCCCAGCTTGGAGGAACTTGAAAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGGGCACTTGGAAATATTCCGGATGATTTAGCTCTTGAGGTATCGTCTCCAGGTGCTGAGAGATTACTCAAGGTCCCAGATCATCTGTTTAGATTTAAAGCCATGCCAATGCGAGTGTGCTACATTGAAGATGTAGAATCGAAAGGCACTGAAAATGATGGAGTTTTTATGTTGGATCATGTGGAATTGGAATCTGAGAGTTGTATCTGGAAATTGGCAAATGTAAGGGAAAATCGAGATCCTTTAAGTAAGGGCAGGCCTTTGACACGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGAAAATCATAAGAAGGTATTCCTTTATCTTGAATGCTGA 924 44.16 MSGNRIAHTLLHRARRAAAFSSFSSAGRPSSLVFSAEARSSQSSCSFSSRHLHFRRQHAFAFSPSATIRLFNTNSSKEFEDEVKEQNPLQSGRDEGEETTDGWEEDDDLEPELGDGGGGGGVVLQGVPWGERVLSLAHEILLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDHLFRFKAMPMRVCYIEDVESKGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYENHKKVFLYLEC 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8883892 8892221 - Tan0011903.2 Tan04g0982 749386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0982 307 Hamap Ribosome maturation factor RimP [rimP]. 131 307 IPR003728 GO:0042274(InterPro)
Tan04g0982 307 PANTHER OSJNBA0006B20.18 PROTEIN 18 307 - -
Tan04g0982 307 MobiDBLite consensus disorder prediction 98 113 - -
Tan04g0982 307 MobiDBLite consensus disorder prediction 77 97 - -
Tan04g0982 307 MobiDBLite consensus disorder prediction 77 121 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0982 Tan-Chr4:8883892 Tan04g1594 Tan-Chr4:26854411 8.60E-85 dispersed
Tan04g0981 Tan-Chr4:8883892 Tan04g0982 Tan-Chr4:8883892 8.60E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0982 - - - 0.0