Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g0983 ATGGATCCCCCACCCTCTTACCGCAGTCGCAGAACCACGAACAAATCTGAGCTCTACTCCACAGTTGTCATCCATTCCAATCCTGATTCCGACTCCGACAACAATCCTACCGATCGGAACCTTCAATGGCGACGAAGGCCGCCGAGCGAAGGTCAAGACCTGTACGCCACAATGGTCTACAAGGACGTTGATAAGGGTCGCGAGGACGAGGATGATGACGATTCCTCTCTCCCTCCTCTCCTCAAACGTCTTCCCAAGGATTTTGGTGGCGGAGCCCCAATTGACTACGAGGACGACGATGATTTTGGATTTGATCACGATACTGAAGACTTTGGTACTATGATCGTCAAGACGGAAAGGAATCGTCCTCGCAATCGCTCCGTGTCTTCATCAGTTTCGACAAAGCCTCGAAGTTCGGCGTTGCCATCCGTGAACTTTCAGACGGGGAGCCCGGGGACGAGAGCAGGCGGAAGAGATGATGGGGAAGAAGGCGATGAGAGCGAGGAAGAGGATGGTGATGGGTATTCGACATTTGTGGTGAGGTCCACGGCGAGGTCGCGGAACAGAGAATCTGTTAGTGGTACTATTGTTCGAAGGACCGGTGGTAGTCGTAGTGATACCAGAGATGGAGGTGGAGAACTTGAGGGGTCCACGTTGGGCAGAGCGGTGGCGAGTATGCAAGGGATGGGAGAGTTAGGGTTTGGGAAACAGAGGAAGGGGAATGGATCGCCGAAGAGTGAGGAAGGCGGTGGTCGGATGCGCAGTAAGGTATCTTCCAGTTCGATTCCTGAAAGCATCACCAGGGAAGATCCAAATTCCAAGTATGAATTGCTCAACGAGCTCGGAAAGGGGTCCTATGGGGCTGTTTATAAAGCAAGGGATATTAAGACCTCTGAGTTGGTTGCTATCAAGGTCATTTCTTTGTGTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATCGAGATGTTACAGCAATGCAGTCATCCAAATGTTGTCCGCTATCTTGGGAGCTATCAAGGAGAGGAGTATCTATGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAATGTTACTGAGGAAGCACTAGAGGAATATCAGATAGCATATATCTGTAGGGAGGCATTGAAGGGCCTCACTTATCTTCACTCAATTTTCAAAGTACATAGAGATATCAAGGGCGGTAATATTTTGTTAACTGAGCAAGGAGATGTCAAGTTGGGCGATTTTGGAGTTGCAGCCCAGCTAACTAGGACCATGTCAAAACGCAATACATTCATTGGCACTCCACATTGGATGGCTCCGGAAGTTATTCAGGAAAGTCGATATGATGGGAAGGTGGATGTGTGGGCTCTTGGTGTTTCTGCTATTGAAATGGCTGAGGGGCTTCCTCCAAGATCTGCCGTGCATCCAATGAGGGTTTTATTCATGATATCTATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCTTGGTGTTCCACGATTTTGTTGCGAAGTGTCTGACAAAAGATACCCGTTCACGTCCTGCTGCTTCTGAGATGTTGAAGCACAAATTCATTGAGAAATGCAGATGTGGGGCGTCAGCAATGTTGCCCAAGATTGAAAAGGCTAGGAAAATCAGGACTTTGATGGCTCAGCAAGCTCATAGTATTCCTCCAGATGCATCAGGAGATGGTACTATAATAGCTGGAAAGCTGAATCAAGATTATGGAGATACAGTTCCTTCAAGGCCTCAGAATATTGGACCTCAGGTAGCAAATGAAATGGCATCTGGTGGCACTTGGAGGAAGCAAGAGCAATTGGAACTTGTAGCCGAAGGTACTTTTGGCACTGTAATAGTACATGATGGAGATGAAAATGATAAGGTGGCCTCTCAACTGGACATTGGCAATGCTGAAACACCAACTGGTCCATCAAGCAATGAGAGCCTATCCGTTCGTGTAACTGGAGTCAAAACTGTTTATTCTAGTGTGGTGGATCGTACGGGAGGTATTGTAAATAATATTCTTGATGGAAAACCAGATCCCGCCATGCTTGCATCTTCACCTTCATTTTTGGGTATTCATGAGCTTAGCACATTGAGGAGTGAAACTGTCAGCCGGAAATCTTTTGCTCTGCAGGACAAGCTTTGGTCCATTTATGCAGCGGGTAATACTGTACCCATTCCGTTCTTGAGGGCTACTGATATATCCCCCATTGCTTTGCTATCTGACAATGTCCTTGGAAGCATGCAGCAAGATAATAGGGGTACTGTAGCAGTGGAAGCGCTTCAGGAACTTTTCACTGGTGATGGACAATCAAAAAAGGGTCGCAGGGGACAAAATGAGATGCCCCTTCCACCCAGTGTTTATCAAAGACTTACTTCAAGTCCGACCCTATTGAACCTTGCCCAGGCTTTAGCTTACCACAGAATGTGTTATGAAGATATGCCGCTTCAGGAGTTGCAGGCGACTCAAGAACAACAAACCATTCAAAATCTTTGCGATACACTTAGAACTATCCTTCGATTGTAG 2541 47.15 MDPPPSYRSRRTTNKSELYSTVVIHSNPDSDSDNNPTDRNLQWRRRPPSEGQDLYATMVYKDVDKGREDEDDDDSSLPPLLKRLPKDFGGGAPIDYEDDDDFGFDHDTEDFGTMIVKTERNRPRNRSVSSSVSTKPRSSALPSVNFQTGSPGTRAGGRDDGEEGDESEEEDGDGYSTFVVRSTARSRNRESVSGTIVRRTGGSRSDTRDGGGELEGSTLGRAVASMQGMGELGFGKQRKGNGSPKSEEGGGRMRSKVSSSSIPESITREDPNSKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLTYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKDTRSRPAASEMLKHKFIEKCRCGASAMLPKIEKARKIRTLMAQQAHSIPPDASGDGTIIAGKLNQDYGDTVPSRPQNIGPQVANEMASGGTWRKQEQLELVAEGTFGTVIVHDGDENDKVASQLDIGNAETPTGPSSNESLSVRVTGVKTVYSSVVDRTGGIVNNILDGKPDPAMLASSPSFLGIHELSTLRSETVSRKSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGSMQQDNRGTVAVEALQELFTGDGQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTIQNLCDTLRTILRL 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8894177 8905532 - Tan0000218.1 Tan04g0983 749387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g0983 846 SMART serkin_6 275 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0983 846 MobiDBLite consensus disorder prediction 231 270 - -
Tan04g0983 846 MobiDBLite consensus disorder prediction 179 201 - -
Tan04g0983 846 CDD STKc_MAP4K3_like 274 529 - -
Tan04g0983 846 Gene3D Transferase(Phosphotransferase) domain 1 271 561 - -
Tan04g0983 846 MobiDBLite consensus disorder prediction 125 152 - -
Tan04g0983 846 FunFam serine/threonine-protein kinase dst1 isoform X1 272 561 - -
Tan04g0983 846 ProSitePatterns Protein kinases ATP-binding region signature. 281 304 IPR017441 GO:0005524(InterPro)
Tan04g0983 846 MobiDBLite consensus disorder prediction 253 268 - -
Tan04g0983 846 FunFam Aurora kinase A 267 356 - -
Tan04g0983 846 SUPERFAMILY Protein kinase-like (PK-like) 272 530 IPR011009 -
Tan04g0983 846 ProSiteProfiles Protein kinase domain profile. 275 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0983 846 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 218 563 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
Tan04g0983 846 Pfam Protein kinase domain 275 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g0983 846 MobiDBLite consensus disorder prediction 24 216 - -
Tan04g0983 846 MobiDBLite consensus disorder prediction 107 124 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4377 Tan-Chr1:108689719 Tan04g0983 Tan-Chr4:8894177 5.30E-66 dispersed
Tan04g0983 Tan-Chr4:8894177 Tan04g0985 Tan-Chr4:8894177 0.00E+00 dispersed
Tan04g0983 Tan-Chr4:8894177 Tan04g0984 Tan-Chr4:8894177 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67443 PF00069 Pkinase 3.10E-67 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g0983 - - - 0.0